BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P11
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 35 0.41
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 35 0.41
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 35 0.41
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 35 0.41
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 35 0.41
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 35 0.41
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 33 1.3
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 33 1.3
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 33 1.7
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.9
X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein. 31 3.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.9
BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility c... 31 3.9
BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility c... 31 3.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 31 6.7
AF086921-1|AAP97151.1| 526|Homo sapiens D-myo-inositol-3-phosph... 31 6.7
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 30 8.9
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 30 8.9
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 30 8.9
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 30 8.9
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP--PLSSXAPSAYLTPSXT 716
H P + PDS HQP T PFP P +PY A P P SS S + P+ T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP--PLSSXAPSAYLTPSXT 716
H P + PDS HQP T PFP P +PY A P P SS S + P+ T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPADT 221
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP--PLSSXAPSAYLTPSXT 716
H P + PDS HQP T PFP P +PY A P P SS S + P+ T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP--PLSSXAPSAYLTPSXT 716
H P + PDS HQP T PFP P +PY A P P SS S + P+ T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP--PLSSXAPSAYLTPSXT 716
H P + PDS HQP T PFP P +PY A P P SS S + P+ T
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 218
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP--PLSSXAPSAYLTPSXT 716
H P + PDS HQP T PFP P +PY A P P SS S + P+ T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 489 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP 668
S +W P PPL S L + P S QPP P P P+ + PG +P
Sbjct: 36 SWMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQP 91
Query: 669 PLSSXAP 689
P + +P
Sbjct: 92 PFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 489 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKP 668
S +W P PPL S L + P S QPP P P P+ + PG +P
Sbjct: 36 SWMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQP 91
Query: 669 PLSSXAP 689
P + +P
Sbjct: 92 PFDAQSP 98
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 531 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAP 689
PPL S L + P S QPP P P P+ + PG +PP + +P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein.
Length = 703
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +3
Query: 534 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSX 713
P + L QP +P P QT P P+ P +PG PP AP+ + P
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 714 TGHG 725
G
Sbjct: 628 MNFG 631
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +3
Query: 534 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSX 713
P + L QP +P P QT P P+ P +PG PP AP+ + P
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 714 TGHG 725
G
Sbjct: 628 MNFG 631
>BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +3
Query: 534 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSX 713
P + L QP +P P QT P P+ P +PG PP AP+ + P
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 714 TGHG 725
G
Sbjct: 628 MNFG 631
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 247 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 408
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 507 SRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 599
S P++S HP + +H Q P + QPPQ
Sbjct: 99 SLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>AF086921-1|AAP97151.1| 526|Homo sapiens D-myo-inositol-3-phosphate
synthase protein.
Length = 526
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = -3
Query: 473 ASTLPP-STVTSAVVQQRSTVTGILR--LGAEGKTTASRLTRYASR*PFMME 327
A +PP S V +A+ +QRS + ILR +G+ +TT S T+++++ P E
Sbjct: 465 APLVPPGSPVVNALFRQRSCIENILRACVGSRHRTTCSWNTKWSAQGPASSE 516
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 474 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPYYXEF 650
HP I H W + PP QP H PP H PS +P PY+ +
Sbjct: 563 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPYF-DL 618
Query: 651 APGLKPPL 674
GL PL
Sbjct: 619 PAGLMAPL 626
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 474 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPYYXEF 650
HP I H W + PP QP H PP H PS +P PY+ +
Sbjct: 563 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPYF-DL 618
Query: 651 APGLKPPL 674
GL PL
Sbjct: 619 PAGLMAPL 626
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 474 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPYYXEF 650
HP I H W + PP QP H PP H PS +P PY+ +
Sbjct: 595 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPYF-DL 650
Query: 651 APGLKPPL 674
GL PL
Sbjct: 651 PAGLMAPL 658
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 474 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPYYXEF 650
HP I H W + PP QP H PP H PS +P PY+ +
Sbjct: 78 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPYF-DL 133
Query: 651 APGLKPPL 674
GL PL
Sbjct: 134 PAGLMAPL 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,374,201
Number of Sequences: 237096
Number of extensions: 2446492
Number of successful extensions: 5541
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5532
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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