Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P11
(829 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p pro... 32 0.83
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 32 0.83
AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA... 32 0.83
AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC... 32 0.83
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 32 1.1
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 32 1.1
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 32 1.1
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 32 1.1
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 32 1.1
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 32 1.1
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ... 29 7.8
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA... 29 7.8
>AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p
protein.
Length = 292
Score = 32.3 bits (70), Expect = 0.83
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +3
Query: 498 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYYXEFAPGLKP 668
Y + P H PL + R H H P S P P P+PS P +P PG
Sbjct: 126 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHS 185
Query: 669 PLSSXAPSAYLTPS 710
P + P + PS
Sbjct: 186 PSQAMYPLDFFPPS 199
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 32.3 bits (70), Expect = 0.83
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 1142 RTSSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 1199
Query: 726 *KGFRPP 746
G PP
Sbjct: 1200 GSGPPPP 1206
>AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA,
isoform A protein.
Length = 557
Score = 32.3 bits (70), Expect = 0.83
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +3
Query: 498 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYYXEFAPGLKP 668
Y + P H PL + R H H P S P P P+PS P +P PG
Sbjct: 349 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHS 408
Query: 669 PLSSXAPSAYLTPS 710
P + P + PS
Sbjct: 409 PSQAMYPLDFFPPS 422
>AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC,
isoform C protein.
Length = 891
Score = 32.3 bits (70), Expect = 0.83
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +3
Query: 498 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYYXEFAPGLKP 668
Y + P H PL + R H H P S P P P+PS P +P PG
Sbjct: 683 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHS 742
Query: 669 PLSSXAPSAYLTPS 710
P + P + PS
Sbjct: 743 PSQAMYPLDFFPPS 756
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 310 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 367
Query: 726 *KGFRPP 746
G PP
Sbjct: 368 GSGPPPP 374
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 1199
Query: 726 *KGFRPP 746
G PP
Sbjct: 1200 GSGPPPP 1206
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 1199
Query: 726 *KGFRPP 746
G PP
Sbjct: 1200 GSGPPPP 1206
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 1199
Query: 726 *KGFRPP 746
G PP
Sbjct: 1200 GSGPPPP 1206
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 1199
Query: 726 *KGFRPP 746
G PP
Sbjct: 1200 GSGPPPP 1206
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 546 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYXEFAPGLKPPLSSXAPSAYLTPSXTGHG 725
R P Q P S+H P + P S P T PG PP S P A+ T G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQS--PHAHRTSPLPGLA 1199
Query: 726 *KGFRPP 746
G PP
Sbjct: 1200 GSGPPPP 1206
>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
initiation factoreIF4G protein.
Length = 1666
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 225 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 350
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612
>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
protein.
Length = 1345
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 225 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 350
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,855,817
Number of Sequences: 53049
Number of extensions: 754776
Number of successful extensions: 2592
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2589
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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