Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P10
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 186 2e-47
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 184 6e-47
01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847... 31 0.89
02_01_0258 - 1709672-1709752,1710277-1710460,1710627-1710841,171... 29 3.6
09_01_0170 - 2459344-2459493,2459720-2459784,2459905-2459963,246... 28 8.3
07_01_1004 + 8500584-8501881,8502194-8502402,8503024-8503266,850... 28 8.3
01_05_0125 - 18382402-18382761,18382863-18383036 28 8.3
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 186 bits (453), Expect = 2e-47
Identities = 87/146 (59%), Positives = 111/146 (76%), Gaps = 1/146 (0%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK++KKE EAVTIIETPP+V VG+V Y++TP GLR+L +VWA+H+SE+ RRRFYKNW
Sbjct: 63 PGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLK-QRQKKAHIM 579
K KKKAFTK + K+ + G+K I M +Y S+VRVIAHTQ++ +K +QKKAH+M
Sbjct: 123 CKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLM 182
Query: 580 EIQLNGGTIXDKVKWATXHLEKPIPV 657
EIQ+NGGTI DKV + EK IPV
Sbjct: 183 EIQINGGTIADKVDYGYKFFEKEIPV 208
Score = 110 bits (265), Expect = 1e-24
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F+HP HGS+GF P+KRS RHRGKVK+FPKDD SKP HLT+F+GYKAGMTH+VRE ++PG
Sbjct: 6 FEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVEKPGS 65
Query: 231 K 233
K
Sbjct: 66 K 66
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VF +DEMID I +RW LPRKTH GLRKVACIGAWHP+RV +TV
Sbjct: 209 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVA 268
Query: 839 RAGQ 850
RAGQ
Sbjct: 269 RAGQ 272
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 184 bits (449), Expect = 6e-47
Identities = 87/146 (59%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK++KKE EAVTIIETPP+V VG+V Y++TP GLR+L +VWA+H+SE+ RRRFYKNW
Sbjct: 63 PGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLK-QRQKKAHIM 579
K KKKAFTK + K+ + G+K I M +Y SVVRVI HTQ++ +K +QKKAH+M
Sbjct: 123 CKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAHLM 182
Query: 580 EIQLNGGTIXDKVKWATXHLEKPIPV 657
EIQ+NGGTI DKV + EK IPV
Sbjct: 183 EIQINGGTIADKVDYGYKFFEKEIPV 208
Score = 109 bits (262), Expect = 3e-24
Identities = 44/61 (72%), Positives = 54/61 (88%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F+HP HGS+GF P+KRS RHRGKVK+FPKDD +KP HLT+F+GYKAGMTH+VRE ++PG
Sbjct: 6 FEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREVEKPGS 65
Query: 231 K 233
K
Sbjct: 66 K 66
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VF +DEMID I +RW LPRKTH GLRKVACIGAWHP+RV +TV
Sbjct: 209 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVA 268
Query: 839 RAGQ 850
RAGQ
Sbjct: 269 RAGQ 272
>01_06_0083 +
26283492-26283756,26284255-26284467,26284620-26284771,
26284884-26285157,26285277-26285485
Length = 370
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 471 NXKRFQXXDPLL*CCKSHCPHSNEAVKTATKEGSHYGNP 587
N +RF DPLL CC H P+ A T + + +G+P
Sbjct: 297 NPRRFGINDPLLACCGGHGPYHTGA--TCDRTATVWGDP 333
>02_01_0258 -
1709672-1709752,1710277-1710460,1710627-1710841,
1711321-1711390,1711525-1711607,1711720-1711884,
1712068-1712172,1713021-1713140,1713620-1713718,
1713790-1713885,1714367-1714480,1715265-1715372,
1716200-1716264,1716430-1716609,1716747-1717397,
1717497-1717565,1717639-1717858
Length = 874
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 382 RRFYKNWYKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYC 507
RRF + KC K + + ++ +LGR + K+F +IR C
Sbjct: 163 RRFTRLMQKCADKLGAEPALEFFGKLGRDTGAKEFNALIRIC 204
>09_01_0170 -
2459344-2459493,2459720-2459784,2459905-2459963,
2460441-2460487,2460793-2460894,2461810-2461935,
2462035-2462169,2463396-2463512,2463583-2463714
Length = 310
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 205 LENLTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALL 345
LE V +S KK + EAV + + VGVV ++ P + L+
Sbjct: 32 LEGAAVVISSRKKKNVDEAVVGLRAKGITVVGVVCHVSIPEQRKNLI 78
>07_01_1004 +
8500584-8501881,8502194-8502402,8503024-8503266,
8503381-8503697,8503891-8504250
Length = 808
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 278 VSMMVTASTISFLLIFETGTVRFSNHVGHTGLITDKSSQMNRFARVV 138
++M VT +T FLL+F T+ S G TD+ S + F +
Sbjct: 1 MTMKVTTATAHFLLVFLASTISHSVICSALGNETDQLSSLLEFKNAI 47
>01_05_0125 - 18382402-18382761,18382863-18383036
Length = 177
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 385 DVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSE 281
++ +L PPR ST R+V E C+ + R + +E
Sbjct: 47 ELGALLPNLPPRASTTRIVEEAIACVGELRARTAE 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,016,164
Number of Sequences: 37544
Number of extensions: 502128
Number of successful extensions: 1056
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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