Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P10
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 223 5e-58
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 223 5e-58
L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein. 223 5e-58
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 223 5e-58
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for IM... 223 5e-58
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 223 5e-58
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 223 5e-58
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3 pr... 223 5e-58
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 223 5e-58
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 213 5e-55
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 213 5e-55
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 213 5e-55
BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein. 144 3e-34
BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein. 92 3e-18
L39061-1|AAA62863.1| 556|Homo sapiens transcription factor SL1 ... 31 7.1
BC018137-1|AAH18137.1| 588|Homo sapiens TATA box binding protei... 31 7.1
AC010969-1|AAX93272.1| 588|Homo sapiens unknown protein. 31 7.1
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 58 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 117
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 118 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 177
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 178 IQVNGGTVAEKLDWARERLEQQVPV 202
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 1 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 60
Query: 231 K-NQQE 245
K N++E
Sbjct: 61 KVNKKE 66
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 203 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 262
Query: 839 RAGQK 853
RAGQK
Sbjct: 263 RAGQK 267
>L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein.
Length = 277
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 114 bits (275), Expect = 3e-25
Identities = 50/66 (75%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KR+ RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRTSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 90.6 bits (215), Expect = 6e-18
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPVRVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for
IMAGE:3538792) protein.
Length = 374
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 34 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 93
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 94 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 153
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 154 IQVNGGTVAEKLDWARERLEQQVPV 178
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 179 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 238
Query: 839 RAGQK 853
RAGQK
Sbjct: 239 RAGQK 243
Score = 77.4 bits (182), Expect = 6e-14
Identities = 34/42 (80%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 KAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFK-NQQE 245
K+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG K N++E
Sbjct: 1 KSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKE 42
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3
protein.
Length = 343
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 8 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 67
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 68 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 127
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 128 IQVNGGTVAEKLDWARERLEQQVPV 152
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 153 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 212
Query: 839 RAGQK 853
RAGQK
Sbjct: 213 RAGQK 217
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 223 bits (546), Expect = 5e-58
Identities = 97/145 (66%), Positives = 120/145 (82%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPV 207
Score = 116 bits (278), Expect = 1e-25
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 213 bits (521), Expect = 5e-55
Identities = 95/145 (65%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+W
Sbjct: 63 PGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTKA +W+D G+K + KDF M +YC V+RVI HTQMKLL RQKKAHIME
Sbjct: 123 HKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGGT+ +KV WA LEK +PV
Sbjct: 183 IQLNGGTVAEKVAWAQARLEKQVPV 207
Score = 102 bits (245), Expect = 1e-21
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE RPG
Sbjct: 6 FSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGL 65
Query: 231 K 233
K
Sbjct: 66 K 66
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
SVF+Q E+ID I SRWHT LPRKTH GLRKVACIGAWHP+RV ++ R
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIAR 268
Query: 842 AGQK 853
AGQK
Sbjct: 269 AGQK 272
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 213 bits (521), Expect = 5e-55
Identities = 95/145 (65%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+W
Sbjct: 63 PGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTKA +W+D G+K + KDF M +YC V+RVI HTQMKLL RQKKAHIME
Sbjct: 123 HKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGGT+ +KV WA LEK +PV
Sbjct: 183 IQLNGGTVAEKVAWAQARLEKQVPV 207
Score = 102 bits (245), Expect = 1e-21
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE RPG
Sbjct: 6 FSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGL 65
Query: 231 K 233
K
Sbjct: 66 K 66
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
SVF+Q E+ID I SRWHT LPRKTH GLRKVACIGAWHP+RV ++ R
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIAR 268
Query: 842 AGQK 853
AGQK
Sbjct: 269 AGQK 272
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 213 bits (521), Expect = 5e-55
Identities = 95/145 (65%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+W
Sbjct: 62 PGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDW 121
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
+K KKKAFTKA +W+D G+K + KDF M +YC V+RVI HTQMKLL RQKKAHIME
Sbjct: 122 HKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIME 181
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGGT+ +KV WA LEK +PV
Sbjct: 182 IQLNGGTVAEKVAWAQARLEKQVPV 206
Score = 102 bits (245), Expect = 1e-21
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE RPG
Sbjct: 5 FSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGL 64
Query: 231 K 233
K
Sbjct: 65 K 65
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
SVF+Q E+ID I SRWHT LPRKTH GLRKVACIGAWHP+RV ++ R
Sbjct: 208 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIAR 267
Query: 842 AGQK 853
AGQK
Sbjct: 268 AGQK 271
>BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein.
Length = 292
Score = 144 bits (350), Expect = 3e-34
Identities = 61/96 (63%), Positives = 77/96 (80%)
Frame = +1
Query: 370 EDCRRRFYKNWYKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLL 549
++C+RRFYKNW+K KKKAFTK KWQDE G+K + KDF M +YC V+RVIAHTQM+LL
Sbjct: 1 DECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLL 60
Query: 550 KQRQKKAHIMEIQLNGGTIXDKVKWATXHLEKPIPV 657
RQKKAH+MEIQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 61 PLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 96
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 97 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 156
Query: 839 RAGQK 853
RAGQK
Sbjct: 157 RAGQK 161
>BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein.
Length = 251
Score = 91.9 bits (218), Expect = 3e-18
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
+ VF QDEMID I SRWHT LPRKTH GLRKVACIGAWHP+RV F+V
Sbjct: 56 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 115
Query: 839 RAGQK 853
RAGQK
Sbjct: 116 RAGQK 120
Score = 83.0 bits (196), Expect = 1e-15
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +1
Query: 493 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIXDKVKWATXHLEKPIPV 657
M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+NGGT+ +K+ WA LE+ +PV
Sbjct: 1 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 55
>L39061-1|AAA62863.1| 556|Homo sapiens transcription factor SL1
protein.
Length = 556
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 391 YKNWYKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKK 567
++ WY+ KKAF + KW +E K + K + Y V + +A+ + +++ QK+
Sbjct: 434 FRKWYQIMKKAFDEKKQKW-EEARAKYLWKS-EKPLYYSFVDKPVAYKKREMVVNLQKQ 490
>BC018137-1|AAH18137.1| 588|Homo sapiens TATA box binding protein
(TBP)-associated factor, RNA polymerase I, B, 63kDa
protein.
Length = 588
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 391 YKNWYKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKK 567
++ WY+ KKAF + KW +E K + K + Y V + +A+ + +++ QK+
Sbjct: 400 FRKWYQIMKKAFDEKKQKW-EEARAKYLWKS-EKPLYYSFVDKPVAYKKREMVVNLQKQ 456
>AC010969-1|AAX93272.1| 588|Homo sapiens unknown protein.
Length = 588
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 391 YKNWYKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKK 567
++ WY+ KKAF + KW +E K + K + Y V + +A+ + +++ QK+
Sbjct: 400 FRKWYQIMKKAFDEKKQKW-EEARAKYLWKS-EKPLYYSFVDKPVAYKKREMVVNLQKQ 456
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,489,475
Number of Sequences: 237096
Number of extensions: 2799800
Number of successful extensions: 4834
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4834
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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