Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P10
(854 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 251 8e-67
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 251 8e-67
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 251 8e-67
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 251 8e-67
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 251 8e-67
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 116 3e-26
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 108 8e-24
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 251 bits (615), Expect = 8e-67
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 74 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 133
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
YK KKKAFTKAS KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 134 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 193
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGG+I DKVKWA HLEKPI V
Sbjct: 194 IQLNGGSIEDKVKWAREHLEKPIQV 218
Score = 116 bits (280), Expect = 3e-26
Identities = 53/66 (80%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 231 K-NQQE 245
K N++E
Sbjct: 77 KINKKE 82
Score = 94.7 bits (225), Expect = 1e-19
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
+VF QDEMIDC+ SRWHT LPRKTH GLRKVACIGAWHPSRV TV R
Sbjct: 220 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVAR 279
Query: 842 AGQK 853
AGQK
Sbjct: 280 AGQK 283
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 251 bits (615), Expect = 8e-67
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
YK KKKAFTKAS KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 123 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGG+I DKVKWA HLEKPI V
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQV 207
Score = 116 bits (280), Expect = 3e-26
Identities = 53/66 (80%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KINKKE 71
Score = 94.7 bits (225), Expect = 1e-19
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
+VF QDEMIDC+ SRWHT LPRKTH GLRKVACIGAWHPSRV TV R
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVAR 268
Query: 842 AGQK 853
AGQK
Sbjct: 269 AGQK 272
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 251 bits (615), Expect = 8e-67
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 109
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
YK KKKAFTKAS KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGG+I DKVKWA HLEKPI V
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQV 194
Score = 105 bits (252), Expect = 8e-23
Identities = 48/58 (82%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFK-NQQE 245
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG K N++E
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKE 58
Score = 94.7 bits (225), Expect = 1e-19
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
+VF QDEMIDC+ SRWHT LPRKTH GLRKVACIGAWHPSRV TV R
Sbjct: 196 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVAR 255
Query: 842 AGQK 853
AGQK
Sbjct: 256 AGQK 259
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 251 bits (615), Expect = 8e-67
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 109
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
YK KKKAFTKAS KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGG+I DKVKWA HLEKPI V
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQV 194
Score = 105 bits (252), Expect = 8e-23
Identities = 48/58 (82%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFK-NQQE 245
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG K N++E
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKE 58
Score = 94.7 bits (225), Expect = 1e-19
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
+VF QDEMIDC+ SRWHT LPRKTH GLRKVACIGAWHPSRV TV R
Sbjct: 196 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVAR 255
Query: 842 AGQK 853
AGQK
Sbjct: 256 AGQK 259
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 251 bits (615), Expect = 8e-67
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
YK KKKAFTKAS KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 123 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQLNGG+I DKVKWA HLEKPI V
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQV 207
Score = 116 bits (280), Expect = 3e-26
Identities = 53/66 (80%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KINKKE 71
Score = 94.7 bits (225), Expect = 1e-19
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +2
Query: 662 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPR 841
+VF QDEMIDC+ SRWHT LPRKTH GLRKVACIGAWHPSRV TV R
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVAR 268
Query: 842 AGQK 853
AGQK
Sbjct: 269 AGQK 272
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 116 bits (280), Expect = 3e-26
Identities = 53/66 (80%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KINKKE 71
Score = 116 bits (278), Expect = 5e-26
Identities = 48/61 (78%), Positives = 56/61 (91%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 122
Query: 403 Y 405
Y
Sbjct: 123 Y 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 108 bits (260), Expect = 8e-24
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 399
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 105 bits (252), Expect = 8e-23
Identities = 48/58 (82%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFK-NQQE 245
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG K N++E
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKE 58
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,462,513
Number of Sequences: 53049
Number of extensions: 834906
Number of successful extensions: 2122
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2122
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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