Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P10
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 219 2e-57
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 219 2e-57
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 219 2e-57
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 164 8e-41
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 164 8e-41
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 116 2e-26
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein. 29 3.2
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.2
Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical p... 28 7.4
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 219 bits (536), Expect = 2e-57
Identities = 97/145 (66%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
K KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGTI KV WA HLEK + V
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQV 207
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VFAQDEMID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 219 bits (536), Expect = 2e-57
Identities = 97/145 (66%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
K KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGTI KV WA HLEK + V
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQV 207
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VFAQDEMID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 219 bits (536), Expect = 2e-57
Identities = 97/145 (66%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
K KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGTI KV WA HLEK + V
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQV 207
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VFAQDEMID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 219 bits (536), Expect = 2e-57
Identities = 97/145 (66%), Positives = 117/145 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
K KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGTI KV WA HLEK + V
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQV 207
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VFAQDEMID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 839 RAGQK 853
RAGQK
Sbjct: 268 RAGQK 272
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 164 bits (398), Expect = 8e-41
Identities = 72/106 (67%), Positives = 85/106 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 540
K KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/63 (65%), Positives = 42/63 (66%)
Frame = +2
Query: 665 VFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPRA 844
V A +MID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 845 GQK 853
GQK
Sbjct: 222 GQK 224
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 164 bits (398), Expect = 8e-41
Identities = 72/106 (67%), Positives = 85/106 (80%)
Frame = +1
Query: 223 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 402
P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 540
K KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 K-NQQE 245
K N++E
Sbjct: 66 KVNKKE 71
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/63 (65%), Positives = 42/63 (66%)
Frame = +2
Query: 665 VFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVPRA 844
V A +MID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 845 GQK 853
GQK
Sbjct: 222 GQK 224
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 116 bits (279), Expect = 2e-26
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +1
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
Y+ + KAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGTI KV WA HLEK + V
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQV 109
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VFAQDEMID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 169
Query: 839 RAGQK 853
RAGQK
Sbjct: 170 RAGQK 174
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 137
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 116 bits (279), Expect = 2e-26
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +1
Query: 403 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 582
Y+ + KAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 583 IQLNGGTIXDKVKWATXHLEKPIPV 657
IQ+NGGTI KV WA HLEK + V
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQV 109
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +2
Query: 659 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXXLPRKTHXGLRKVACIGAWHPSRVLFTVP 838
D+VFAQDEMID I SRWHT LPRKTH GLRKVACIGAWHPSRV FTV
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 169
Query: 839 RAGQK 853
RAGQK
Sbjct: 170 RAGQK 174
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 137
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 277 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 405
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical
protein F10B5.6 protein.
Length = 655
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 161 MNRFARVVFRERLDLTTMTTGPLFGIESHRPMSGVLKIFCATWLEDSRXL 12
M R R R T T LF + P +L+I C T L+DSR L
Sbjct: 278 MERAQRAYEMGRFRETKKITDELFDLFGPHPECIILRIHCLTMLKDSRSL 327
>AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein.
Length = 655
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 161 MNRFARVVFRERLDLTTMTTGPLFGIESHRPMSGVLKIFCATWLEDSRXL 12
M R R R T T LF + P +L+I C T L+DSR L
Sbjct: 278 MERAQRAYEMGRFRETKKITDELFDLFGPHPECIILRIHCLTMLKDSRSL 327
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 258 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 425
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical
protein T09E11.12 protein.
Length = 323
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 141 DPSKPVHLTAFIGYKAGMT-HVVREPDRPGFKNQQERDRGGCHHHRDSSDGLCRC 302
DPSKP++L GY +G + +++ F + D GC + G+ RC
Sbjct: 182 DPSKPLYLGYKNGYNSGGSGYILSNAAVKLFVEKSYHDEYGCPYDWAEDHGIGRC 236
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 703 DTNAVNHFILGKHRIEQG*VSPD 635
D+N +NHF + KH++EQ + P+
Sbjct: 467 DSNVINHFAVTKHQMEQLDLRPE 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,996,690
Number of Sequences: 27780
Number of extensions: 419199
Number of successful extensions: 981
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -