Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P07
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 292 2e-79
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 292 2e-79
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 277 6e-75
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 276 2e-74
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 29 5.6
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 292 bits (717), Expect = 2e-79
Identities = 145/191 (75%), Positives = 160/191 (83%)
Frame = +3
Query: 153 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSS 332
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAY NVV ARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 333 WRVISSIEQKTXGSXRKQQMAKEYXVKVQKXLTEICYDVLGLLDKHLIPKASNPXSKVFY 512
WRVISSIEQKT GS +KQQMAKEY KV+K L +IC DVL LLDK LIPKA SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120
Query: 513 LKMKXDYYRYLAXVATGETXHSVVQDSXKAYXDAFEIXKAKMQPTHPIRLGLALNFSXFY 692
LKMK DYYRYLA VA+G+ +SVV+ S ++Y +AF+I K KMQPTHPIRLGLALNFS F+
Sbjct: 121 LKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFF 180
Query: 693 YEILNSPXKAC 725
YEILN+P KAC
Sbjct: 181 YEILNAPDKAC 191
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 292 bits (717), Expect = 2e-79
Identities = 145/191 (75%), Positives = 160/191 (83%)
Frame = +3
Query: 153 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSS 332
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAY NVV ARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 333 WRVISSIEQKTXGSXRKQQMAKEYXVKVQKXLTEICYDVLGLLDKHLIPKASNPXSKVFY 512
WRVISSIEQKT GS +KQQMAKEY KV+K L +IC DVL LLDK LIPKA SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120
Query: 513 LKMKXDYYRYLAXVATGETXHSVVQDSXKAYXDAFEIXKAKMQPTHPIRLGLALNFSXFY 692
LKMK DYYRYLA VA+G+ +SVV+ S ++Y +AF+I K KMQPTHPIRLGLALNFS F+
Sbjct: 121 LKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFF 180
Query: 693 YEILNSPXKAC 725
YEILN+P KAC
Sbjct: 181 YEILNAPDKAC 191
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 277 bits (680), Expect = 6e-75
Identities = 143/191 (74%), Positives = 156/191 (81%)
Frame = +3
Query: 153 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSS 332
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAY NVV ARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 333 WRVISSIEQKTXGSXRKQQMAKEYXVKVQKXLTEICYDVLGLLDKHLIPKASNPXSKVFY 512
WRVISSIEQKT GS +KQQ+AKEY VKV++ L +IC DVL LLD+ LI KA SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFY 120
Query: 513 LKMKXDYYRYLAXVATGETXHSVVQDSXKAYXDAFEIXKAKMQPTHPIRLGLALNFSXFY 692
LKMK DYYRYLA VA+ E +VV+ S KAY +A +I K KMQPTHPIRLGLALNFS FY
Sbjct: 121 LKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFY 179
Query: 693 YEILNSPXKAC 725
YEILN+P AC
Sbjct: 180 YEILNTPEHAC 190
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 276 bits (676), Expect = 2e-74
Identities = 142/191 (74%), Positives = 155/191 (81%)
Frame = +3
Query: 153 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSS 332
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAY NVV ARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 333 WRVISSIEQKTXGSXRKQQMAKEYXVKVQKXLTEICYDVLGLLDKHLIPKASNPXSKVFY 512
WRVISSIEQKT GS +KQQ+AKEY VKV++ L +IC DVL LLD+ LI KA SK FY
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKAFY 120
Query: 513 LKMKXDYYRYLAXVATGETXHSVVQDSXKAYXDAFEIXKAKMQPTHPIRLGLALNFSXFY 692
LKMK DYYRYLA VA+ E +VV+ S KAY +A +I K KMQPTHPIRLGLALNFS FY
Sbjct: 121 LKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFY 179
Query: 693 YEILNSPXKAC 725
YEILN+P AC
Sbjct: 180 YEILNTPEHAC 190
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 519 MKXDYYRYLAXVAT-GETXHSVVQDSXKAYXDAFEIXKAKMQPTHPIRLGLALNFSXFYY 695
M D++RYL H+ S AY +A I K KMQPTHPIRLGLALN S +
Sbjct: 1 MVADHFRYLVQYDDINREEHA--HKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNF 58
Query: 696 EILNSPXKA 722
++LN P +A
Sbjct: 59 DVLNLPKEA 67
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = -2
Query: 269 AKFDAGFRHFLHRGRHVVISLSLFGQFGT-LHQFF-LVDGHRGRWKRTNSLMPDLVETR- 99
A F A + R V I L LF + H F L+D H G TNS M ++ + R
Sbjct: 114 APFSARLQTICPRHNLVAIPLILFFTGASCFHMNFKLLDDHAGSGNFTNSTMENIEDNRI 173
Query: 98 -CLGVQTLFLFYF 63
+ V T+F+F F
Sbjct: 174 TLIQVMTVFMFIF 186
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 132 SPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV-ELSNEERNLLSVAYXN 308
SPL + + + R KLAEQA+R V ++GV EL + + ++VAY N
Sbjct: 239 SPLHNYIYRTSRHSPLYRKKLAEQAQRMAVKNGTF--VNDSGVIELLSHLLD-INVAYEN 295
Query: 309 VVXARRSSWRVISSIEQKTXGSXRKQQMAK 398
+V + +I + +K GS + ++++
Sbjct: 296 LV-TKNEKLEIIGTFCEKNKGSFKVDELSR 324
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 256 ASNLATRRGTSFQLLIXMSXVPDGHHGVSFP 348
A ++TR G Q + +PD HH +FP
Sbjct: 111 AERISTRFGVELQSFLPQEVLPDEHHPSNFP 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,261,498
Number of Sequences: 27780
Number of extensions: 293478
Number of successful extensions: 623
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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