Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_P06
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...   116   4e-26
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...   116   4e-26
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   6.0  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score =  116 bits (279), Expect = 4e-26
 Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
 Frame = +2

Query: 167 VAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKRLKLHQFI 346
           + Q++ YHGQ LQK W+   G  DL  +G+  +++ VYQ R K+ TFQ+R KRLK+HQF+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMHQFL 65

Query: 347 XKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLY-ALMPPFETFLNV-DKTXRLXHFFDN 520
            ++A  L+D +L+ +    S      L+ + N Y   M PFE FLNV DK     H    
Sbjct: 66  ARKATDLYDRTLVANVMEDS------LLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSA 119

Query: 521 VXTGELIIGXVINXTASG--MMLKVLCTAGPTSXYVXDINVXA-FLPXGNIIQAVDXKNV 691
           +  G++I   V    ASG  +++K LCTA P   Y+ DI + A  L        +D +  
Sbjct: 120 LKQGDIIYTQV-TRLASGNRLIVKPLCTAEPKHAYLADIPIKAVILQDFWGPLPLDKQGN 178

Query: 692 SXNYLMNDTVCCEXIQVIPHTDKMVCGM 775
             +++ ND + CE   +   T+++   M
Sbjct: 179 PRSFVQNDILRCEINNISADTERLSLNM 206


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score =  116 bits (279), Expect = 4e-26
 Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
 Frame = +2

Query: 167 VAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKRLKLHQFI 346
           + Q++ YHGQ LQK W+   G  DL  +G+  +++ VYQ R K+ TFQ+R KRLK+HQF+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMHQFL 65

Query: 347 XKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLY-ALMPPFETFLNV-DKTXRLXHFFDN 520
            ++A  L+D +L+ +    S      L+ + N Y   M PFE FLNV DK     H    
Sbjct: 66  ARKATDLYDRTLVANVMEDS------LLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSA 119

Query: 521 VXTGELIIGXVINXTASG--MMLKVLCTAGPTSXYVXDINVXA-FLPXGNIIQAVDXKNV 691
           +  G++I   V    ASG  +++K LCTA P   Y+ DI + A  L        +D +  
Sbjct: 120 LKQGDIIYTQV-TRLASGNRLIVKPLCTAEPKHAYLADIPIKAVILQDFWGPLPLDKQGN 178

Query: 692 SXNYLMNDTVCCEXIQVIPHTDKMVCGM 775
             +++ ND + CE   +   T+++   M
Sbjct: 179 PRSFVQNDILRCEINNISADTERLSLNM 206


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 570 DAVXLITXPMISSPVFTLSKKCXNLXVLSTFKNVS-NGGINAYKLXSGTRVSVPLVDDEG 394
           D + L+     S    T  +KC     LS    V  +G +       G    + + DDEG
Sbjct: 142 DLIALLKGTDTSHDQPTGEEKCTLEKALSELDGVGEDGDVGVTIEGEGQFEIMEIDDDEG 201

Query: 393 VSSSKEESNKAPAS 352
            SSS++ S K PAS
Sbjct: 202 ESSSRKASPKVPAS 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,656,642
Number of Sequences: 53049
Number of extensions: 549692
Number of successful extensions: 1020
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)