Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P01
(885 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 47 3e-05
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 47 3e-05
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 47 3e-05
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 47 3e-05
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 47 3e-05
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 47 3e-05
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 45 2e-04
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 45 2e-04
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 45 2e-04
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 44 2e-04
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 44 3e-04
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 43 5e-04
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 43 5e-04
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 43 5e-04
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 43 5e-04
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 43 5e-04
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 42 9e-04
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 42 9e-04
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 42 9e-04
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 41 0.002
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 41 0.002
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 41 0.002
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 41 0.002
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 41 0.002
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 41 0.003
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 41 0.003
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 41 0.003
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 41 0.003
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 40 0.003
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 40 0.003
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 40 0.003
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 40 0.003
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 40 0.003
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 40 0.005
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 40 0.005
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 40 0.005
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 40 0.005
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 40 0.005
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 40 0.006
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 40 0.006
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 39 0.008
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 39 0.008
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 39 0.008
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 39 0.008
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 35 0.17
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 35 0.17
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 34 0.23
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 34 0.23
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 115 LEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 175 YVPPGIFKSTCKIDITWFPFDDQ 197
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 115 LEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 175 YVPPGIFKSTCKIDITWFPFDDQ 197
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 93 LEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 152
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 153 YVPPGIFKSTCKIDITWFPFDDQ 175
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 115 LEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 175 YVPPGIFKSTCKIDITWFPFDDQ 197
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 115 LEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 175 YVPPGIFKSTCKIDITWFPFDDQ 197
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 96 LEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 155
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 156 YVPPGIFKSTCKIDITWFPFDDQ 178
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 286 NWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 459
+W D +L W E+G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 62 SWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 121
Query: 460 IKRLDISTPISMQLDIWPNDMQ 525
+ + ++ +P D Q
Sbjct: 122 RPPAIYKSSCEIDVEYFPFDEQ 143
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 286 NWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 459
+W D +L W E+G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 81 SWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 140
Query: 460 IKRLDISTPISMQLDIWPNDMQ 525
+ + ++ +P D Q
Sbjct: 141 RPPAIYKSSCEIDVEYFPFDEQ 162
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 286 NWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 459
+W D +L W E+G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 81 SWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 140
Query: 460 IKRLDISTPISMQLDIWPNDMQ 525
+ + ++ +P D Q
Sbjct: 141 RPPAIYKSSCEIDVEYFPFDEQ 162
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 286 NWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 459
+W D +L W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 96 SWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEW 155
Query: 460 IKRLDISTPISMQLDIWPNDMQ 525
+ + ++ +P D Q
Sbjct: 156 KPPAIYKSSCEIDVEYFPFDEQ 177
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 44.0 bits (99), Expect = 3e-04
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 280 WMN--WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 447
W+N W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NG
Sbjct: 81 WLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNG 140
Query: 448 SVSWIKRLDISTPISMQLDIWPNDMQ 525
S ++ + M + +P D Q
Sbjct: 141 SCLYVPPGIFKSTCKMDITWFPFDDQ 166
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 367 LEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 426
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 427 YVPPGIFKSTCKIDITWFPFDDQ 449
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 366 LEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 425
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 426 YVPPGIFKSTCKIDITWFPFDDQ 448
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 318 LEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 377
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 378 YVPPGIFKSTCKIDITWFPFDDQ 400
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 367 LEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 426
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 427 YVPPGIFKSTCKIDITWFPFDDQ 449
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 367 LEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 426
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 427 YVPPGIFKSTCKIDITWFPFDDQ 449
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 42.3 bits (95), Expect = 9e-04
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 280 WMN--WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 447
W+N W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NG
Sbjct: 81 WLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNG 140
Query: 448 SVSWIKRLDISTPISMQLDIWPNDMQ 525
S ++ + + + +P D Q
Sbjct: 141 SCLYVPPGIFKSTCKIDITWFPFDDQ 166
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 42.3 bits (95), Expect = 9e-04
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 280 WMN--WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 447
W+N W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NG
Sbjct: 81 WLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNG 140
Query: 448 SVSWIKRLDISTPISMQLDIWPNDMQ 525
S ++ + + + +P D Q
Sbjct: 141 SCLYVPPGIFKSTCKIDITWFPFDDQ 166
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 42.3 bits (95), Expect = 9e-04
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 280 WMN--WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 447
W+N W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NG
Sbjct: 81 WLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNG 140
Query: 448 SVSWIKRLDISTPISMQLDIWPNDMQ 525
S ++ + + + +P D Q
Sbjct: 141 SCLYVPPGIFKSTCKIDITWFPFDDQ 166
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D + W+ E+G T L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 101 WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKV 157
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + + +P D Q
Sbjct: 158 VWTPPAIFKSSCEIDVRYFPFDQQ 181
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D + W+ E+G T L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 101 WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKV 157
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + + +P D Q
Sbjct: 158 VWTPPAIFKSSCEIDVRYFPFDQQ 181
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D + W+ E+G T L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 101 WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKV 157
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + + +P D Q
Sbjct: 158 VWTPPAIFKSSCEIDVRYFPFDQQ 181
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D + W+ E+G T L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 101 WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKV 157
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + + +P D Q
Sbjct: 158 VWTPPAIFKSSCEIDVRYFPFDQQ 181
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D + W+ E+G T L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 101 WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKV 157
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + + +P D Q
Sbjct: 158 VWTPPAIFKSSCEIDVRYFPFDQQ 181
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 40.7 bits (91), Expect = 0.003
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V
Sbjct: 81 WNDYKLKWNPDDYGGVDTLHVPSEHIWHPDIVLYNNA---DGNYEVTIMTKAILHHTGKV 137
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + ++ +P D Q
Sbjct: 138 VWKPPAIYKSFCEIDVEYFPFDEQ 161
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 99 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCL 158
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 159 YVPPGIFKSTCKIDITWFPFDDQ 181
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCL 143
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 144 YVPPGIFKSTCKIDITWFPFDDQ 166
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCL 143
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + + + +P D Q
Sbjct: 144 YVPPGIFKSTCKIDITWFPFDDQ 166
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D +L W+ E+G L V SE +W PD+VL N G+Y + +A + G V
Sbjct: 67 WFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN---NWDGNYEVTLMTKATLKYTGEV 123
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + M ++ +P D Q
Sbjct: 124 FWEPPAIYKSSCEMNVEYFPYDEQ 147
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D +L W+ E+G L V SE +W PD+VL N G+Y + +A + G V
Sbjct: 86 WFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN---NWDGNYEVTLMTKATLKYTGEV 142
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + M ++ +P D Q
Sbjct: 143 FWEPPAIYKSSCEMNVEYFPYDEQ 166
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 40.3 bits (90), Expect = 0.003
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V ++GS
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHSGSCL 143
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + M + +P D Q
Sbjct: 144 YVPPGIFKSTCKMDITWFPFDDQ 166
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D +L W+ E+G L V SE +W PD+VL N G+Y + +A + G V
Sbjct: 86 WFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN---NWDGNYEVTLMTKATLKYTGEV 142
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + M ++ +P D Q
Sbjct: 143 FWEPPAIYKSSCEMNVEYFPYDEQ 166
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D +L W+ E+G L V SE +W PD+VL N G+Y + +A + G V
Sbjct: 86 WFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN---NWDGNYEVTLMTKATLKYTGEV 142
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + M ++ +P D Q
Sbjct: 143 FWEPPAIYKSSCEMNVEYFPYDEQ 166
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 39.9 bits (89), Expect = 0.005
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V + GS
Sbjct: 98 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTSVVVKHGGSCL 157
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + M + +P D Q
Sbjct: 158 YVPPGIFKSTCKMDITWFPFDDQ 180
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 39.9 bits (89), Expect = 0.005
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V + GS
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTSVVVKHGGSCL 143
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + M + +P D Q
Sbjct: 144 YVPPGIFKSTCKMDITWFPFDDQ 166
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 39.9 bits (89), Expect = 0.005
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V +GS
Sbjct: 99 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKRSGSCL 158
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + M + +P D Q
Sbjct: 159 YVPPGIFKSTCKMDITWFPFDDQ 181
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 39.9 bits (89), Expect = 0.005
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 456
+ W D L WN E+G L ++ +LW+PDV++ N+A G Y V + GS
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHGGSCL 143
Query: 457 WIKRLDISTPISMQLDIWPNDMQ 525
++ + M + +P D Q
Sbjct: 144 YVPPGIFKSTCKMDITWFPFDDQ 166
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 39.9 bits (89), Expect = 0.005
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 453
W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V
Sbjct: 81 WNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKV 137
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W + + ++ +P D Q
Sbjct: 138 VWKPPAIYKSFCEIDVEYFPFDEQ 161
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 39.5 bits (88), Expect = 0.006
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +1
Query: 247 SPPCEYRQIFNWMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAAAT---TAGDY 417
S C +RQ +W+DKRL++ + + R+W+PD N + T
Sbjct: 155 SMDCYFRQ-----SWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTP 209
Query: 418 ALRARVSNNGSVSWIKRLDISTPISMQLDIWPNDMQDLXGSSSVLGMPNSD 570
R+ NG V + RL I M L +P D+Q G SD
Sbjct: 210 NKFVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSD 260
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 39.5 bits (88), Expect = 0.006
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +1
Query: 247 SPPCEYRQIFNWMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAAAT---TAGDY 417
S C +RQ +W+DKRL++ + + R+W+PD N + T
Sbjct: 155 SMDCYFRQ-----SWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTP 209
Query: 418 ALRARVSNNGSVSWIKRLDISTPISMQLDIWPNDMQDLXGSSSVLGMPNSD 570
R+ NG V + RL I M L +P D+Q G SD
Sbjct: 210 NKFVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSD 260
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 39.1 bits (87), Expect = 0.008
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSV 453
W D +L W+ ++G L + +++W+PD+VL N A G+Y +R + + G V
Sbjct: 84 WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEV 140
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W+ + ++ + +P D Q
Sbjct: 141 LWVPPAIYQSSCTIDVTYFPFDQQ 164
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 39.1 bits (87), Expect = 0.008
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSV 453
W D +L W+ ++G L + +++W+PD+VL N A G+Y +R + + G V
Sbjct: 84 WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEV 140
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W+ + ++ + +P D Q
Sbjct: 141 LWVPPAIYQSSCTIDVTYFPFDQQ 164
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 39.1 bits (87), Expect = 0.008
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSV 453
W D +L W+ ++G L + +++W+PD+VL N A G+Y +R + + G V
Sbjct: 84 WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEV 140
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W+ + ++ + +P D Q
Sbjct: 141 LWVPPAIYQSSCTIDVTYFPFDQQ 164
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 39.1 bits (87), Expect = 0.008
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 289 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSV 453
W D +L W+ ++G L + +++W+PD+VL N A G+Y +R + + G V
Sbjct: 84 WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEV 140
Query: 454 SWIKRLDISTPISMQLDIWPNDMQ 525
W+ + ++ + +P D Q
Sbjct: 141 LWVPPAIYQSSCTIDVTYFPFDQQ 164
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWLVSSE-RLWRPDVVLLNAAATTAGD--YALRARVSNNGSV 453
M+W D RL W ++G + R+W+P + +LN A + G + V NGS+
Sbjct: 68 MHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSI 127
Query: 454 S-WIKRLDISTPISMQLDIWPND 519
+ + + L +++ WP++
Sbjct: 128 TLYAQNLQLASWCVDSARNWPSE 150
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWLVSSE-RLWRPDVVLLNAAATTAGD--YALRARVSNNGSV 453
M+W D RL W ++G + R+W+P + +LN A + G + V NGS+
Sbjct: 265 MHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSI 324
Query: 454 S-WIKRLDISTPISMQLDIWPND 519
+ + + L +++ WP++
Sbjct: 325 TLYAQNLQLASWCVDSARNWPSE 347
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 34.3 bits (75), Expect = 0.23
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN 390
+ W D L WN E+G L ++ +LW+PDV++ N
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 34.3 bits (75), Expect = 0.23
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 283 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN 390
+ W D L WN E+G L ++ +LW+PDV++ N
Sbjct: 84 LEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,170,931
Number of Sequences: 53049
Number of extensions: 706586
Number of successful extensions: 2040
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1942
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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