Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_O14
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 66 5e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 1e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 1e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 1e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 4e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 7e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.024
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.22
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 65.7 bits (153), Expect = 5e-13
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +1
Query: 94 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 252
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 253 VRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 426
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 427 VSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
+ G V + + + +P D QTC KFGS ++ Q+D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.5 bits (150), Expect = 1e-12
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 303
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 304 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDIXT 477
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 478 PISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
+ + +P D Q C KFGS ++ +Q+D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.5 bits (150), Expect = 1e-12
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 303
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 304 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDIXT 477
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 478 PISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
+ + +P D Q C KFGS ++ +Q+D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 64.1 bits (149), Expect = 2e-12
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 282
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 283 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 450
W D LSW ++ ++ V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 451 XIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVIDKRIYRM 600
+ + + +WP D C FGS +H+ ++++ +DK+ + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA- 402
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
G Y V++NGS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA- 402
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
G Y V+++GS + + M + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA- 402
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
G Y V+++GS + + M + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA- 402
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
G Y V+++GS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 8e-12
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = +1
Query: 112 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 270
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 271 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 445 VSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
V + + ++ +P D QTC KFGS ++ Q+D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
G Y V+++GS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVI 579
G Y V+++GS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.3 bits (142), Expect = 1e-11
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 285
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 286 IDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXI 456
+D+RL++ G+ + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 457 KRLDIXTPISMQLDNWPNDMQTCTFKFGS 543
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 304 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLD 468
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 469 IXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
+ + ++ +P D Q+C KFGS +N Q+D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.5 bits (140), Expect = 2e-11
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Frame = +1
Query: 190 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 363
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 364 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTF 531
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 532 KFGSRMHNSDQMDFVI 579
KFGS N DQ+ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +1
Query: 139 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXT 477
W E+G L V S+ +WRPD+VL N A A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 478 PISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.0 bits (134), Expect = 1e-10
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 255
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 256 RILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 429
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 430 SNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
NNG+ + + + + +P D Q C KFGS ++ Q+D
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.8 bits (131), Expect = 2e-10
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +1
Query: 112 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 276
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 277 MNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 447
+ W L+W + E+ + V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 448 SXIKRLDIXTPISMQLDN--WPNDMQTCTFKFGSRMHNSDQM 567
+ TP+ + D+ WP D+ CT S H S+++
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLD 468
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 469 IXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
+ S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 6e-10
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Frame = +1
Query: 85 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 243
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 244 ESTVRILADLQMNWIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATTAGDYAL- 417
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 418 ---RARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMD 570
+A + + G V + + ++ +P D QTC KFGS ++ +D
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 193 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPD 369
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 370 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 543
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 544 RMHNSDQMD 570
++ Q++
Sbjct: 152 WTYDGYQLE 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +1
Query: 127 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 291
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 292 KRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 462
RLS+ + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 463 LDIXTPISMQLDNWPNDMQTCTFKFGS 543
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 1e-07
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Frame = +1
Query: 139 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 297
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 298 LSWN--AGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 462
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 463 LDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFV 576
+ + M L +P D Q C+ + S +D + F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 4e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCXTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 543
GS++ RL I M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Frame = +1
Query: 139 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 297
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 298 LSWN--AGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 462
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 463 LDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFV 576
+ + M L +P D Q C+ + S +D + F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCXTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 543
GS++ RL I M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.7 bits (86), Expect = 7e-05
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Frame = +1
Query: 142 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 309
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 310 AGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDIXTP 480
E +E++W PD N + D R R+S +GSV+ R
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 481 ISMQLDNWPNDMQTCTFKFGS 543
M L +P D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 283 WIDKRLSWNAGEWGCXTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 435
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 436 NGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 543
+GS++ RL I M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +1
Query: 115 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 279
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 280 NWIDKRLSW-NAGEWGCXTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 450
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 451 XIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFV 576
+ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +1
Query: 115 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 279
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 280 NWIDKRLSW-NAGEWGCXTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 450
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 451 XIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFV 576
+ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +1
Query: 115 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 279
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 280 NWIDKRLSW-NAGEWGCXTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 450
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 451 XIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFV 576
+ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 11/165 (6%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 276
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 277 MNWIDKRLSW--NAGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNG 441
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 442 SVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFV 576
++ + +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDIXTPISMQLDNWPNDMQ 519
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 520 TCTFKFGSRMHNSDQMDFVIDKRIYRMXD 606
C + S H +D+M F D + + D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWDPDVPLVVD 204
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.010
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCXTWLVSSERLWRP 366
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 367 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTCTFKFG 540
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 541 SRMHNSDQMDFV 576
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 30.3 bits (65), Expect = 0.024
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 355 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMQTC 525
+W P V + N ++A T + + + +G V RL ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 526 TFKFGSRMHN 555
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.1 bits (57), Expect = 0.22
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDIXTPISMQLDNWPND 513
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 514 MQTCTFKFGSRMHNSDQM 567
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,992
Number of Sequences: 438
Number of extensions: 4274
Number of successful extensions: 91
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -