Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_O13
         (841 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo...   138   7e-34
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...   122   5e-29
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...   116   6e-27
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|...    28   1.4  
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar...    27   4.4  
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    26   7.6  

>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 443

 Score =  138 bits (335), Expect = 7e-34
 Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
 Frame = +1

Query: 151 CLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQIPVLLVHGLLQSADSWL 330
           C N+ E+    GY+ EEH V T+D F+L + R++  ++    +  V   HGL+ +++ W+
Sbjct: 72  CRNIYEICEAFGYRVEEHLVRTQDNFILCLHRITHPKQSQHKREVVYCHHGLMTNSELWV 131

Query: 331 DAGPGS-GLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPA 507
                   L ++L ++ +DVWL N RGN YSR+H+T  P  D  +WNFS D++  FD+P 
Sbjct: 132 AVNESERSLPFVLIESGYDVWLGNNRGNKYSRKHITYKP-KDEEFWNFSLDDMAMFDIPD 190

Query: 508 ILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAPA 654
            +DY+L  +  + LNY+GFSQG        S  P+  +K+ + I LAPA
Sbjct: 191 TVDYILRETGREKLNYIGFSQGTAQAMAALSINPDLNDKVNIFIGLAPA 239


>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score =  122 bits (295), Expect = 5e-29
 Identities = 67/173 (38%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
 Frame = +1

Query: 157 NVTELATRHGYQCEEHNVVTEDGFVLTVFRVSS---GQRCSR--TQIPVLLVH-GLLQSA 318
           ++ E+    GY  E+H V TED ++L + R+S    G+  S    ++PV+  H GLL ++
Sbjct: 80  DIREMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVYCHHGLLMNS 139

Query: 319 DSWL-DAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYF 495
           + W+ +  P + L + L +  +DVWL N RGN YSR+HL  D  +D  +W+FS D+   +
Sbjct: 140 EVWVCNVDPRNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFD-STDKEFWDFSIDDFAQY 198

Query: 496 DLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAPA 654
           D+P  +DY+L  S    L Y+GFSQG    F   S  P   +KI  +IALAPA
Sbjct: 199 DIPDTIDYILKTSGQTKLTYIGFSQGTAQAFASLSIHPLLNDKINSLIALAPA 251


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  116 bits (278), Expect = 6e-27
 Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
 Frame = +1

Query: 133 AIRRTPCLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQI----PVLLVH 300
           A + T   +  +L   HGY  EEH V T DG++L + RV   ++    ++    PVL +H
Sbjct: 66  ANKLTDARDTIDLCALHGYDLEEHFVRTTDGYLLGLHRVYKKKKGKIEELNYLPPVLFIH 125

Query: 301 GLLQSADSWL-DAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSA 477
           GL+ +++SW+ +      + + L +  +DVWL N RGN YS +++      +  +W+FS 
Sbjct: 126 GLMMNSESWVCNLKKEDAIPFALVEQGYDVWLGNLRGNKYSIKNIKFS-SQNPKFWDFSL 184

Query: 478 DEIGYFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAPA 654
           D I  FD+P+I+ Y+L+ +  D ++ VGFSQGA   F   S        ++  IALAPA
Sbjct: 185 DSIAIFDIPSIVKYILSVNSFDSISLVGFSQGAILAFAALSIDTELRNSVRAFIALAPA 243


>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
            Snf21|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1199

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -2

Query: 627  DLFTIVRSLGTHDEEGSRALREAHVVEDVGSGPVEDIIKDG 505
            DL T+  +  T++EEGS    +A+ ++      +E++ +DG
Sbjct: 1135 DLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEEDG 1175


>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 902

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 394 SNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLP 504
           SNTR  Y+         DS A  WN+ +  +G   LP
Sbjct: 404 SNTREKYWDNVLTAHKNDSSARTWNWKSKTLGQHVLP 440


>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 647

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 350 PEPGPASSHESALC-SRPCTSSTGICVREHRWPLDTRKTVSTNPSSVTT 207
           P   P+SS  SA   S   T S    V EH  P    + +  +P+S+T+
Sbjct: 155 PANSPSSSSSSASTKSTATTQSADYVVAEHFAPQRNDEQLGNSPASITS 203


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,677,600
Number of Sequences: 5004
Number of extensions: 47685
Number of successful extensions: 138
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)