Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_O10
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-9|AAB93451.1|  480|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical...    29   4.2  
AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical...    29   4.2  
U21319-1|AAC46673.2|  258|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z81039-10|CAB02777.2|  181|Caenorhabditis elegans Hypothetical p...    28   7.4  
Z81571-7|CAB04620.1|  272|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical ...    28   9.7  

>U28739-9|AAB93451.1|  480|Caenorhabditis elegans Hypothetical
           protein C17G10.1 protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 25  AMTTLRLTNSQHGEAVVLERKKMERLSIPSHLIDLHCYI-KTNITSQFG 168
           A T+++++  +HG   VL  +  E+ S   + +D+H ++ KTN   + G
Sbjct: 369 AQTSVKVSRVEHGTYWVLGDEDAEQSSTDGYCLDVHLFVQKTNWDDEAG 417


>AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27b protein.
          Length = 466

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 613 HGKRNQKARSGKSLDLLARESRKRRRESGLQQ 518
           H K  QKARS  +L+ LA++++K + E   Q+
Sbjct: 97  HSKTRQKARSSVTLEKLAQKNQKMKEELKKQE 128


>AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27a protein.
          Length = 574

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 613 HGKRNQKARSGKSLDLLARESRKRRRESGLQQ 518
           H K  QKARS  +L+ LA++++K + E   Q+
Sbjct: 205 HSKTRQKARSSVTLEKLAQKNQKMKEELKKQE 236


>U21319-1|AAC46673.2|  258|Caenorhabditis elegans Hypothetical
           protein C30G12.4 protein.
          Length = 258

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +1

Query: 607 CRECSXEQKLALKIGEVPELLCQTMLSLGFLLVITP-PLCSSG*DRPPTFISSHSFRPPS 783
           CR C    +         E      LS+ FL  I+P P C      PP+ ++SHSF   S
Sbjct: 49  CRRCLDASRHCFSTRSRTEERLLLQLSIPFLHQISPKPAC------PPSSLNSHSFECCS 102

Query: 784 FPILLXXVFATGFLMTYHG 840
                  +  +  L+ Y+G
Sbjct: 103 LTFSYSYMMVSCKLLLYYG 121


>Z81039-10|CAB02777.2|  181|Caenorhabditis elegans Hypothetical
           protein C25D7.7 protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 698 RNPRESIV*QRSSGTSPILRA-SFCSLEHSRQKKSKSAL 585
           RN +E IV  + S   PIL   + C L H RQ +S+  L
Sbjct: 94  RNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEEGL 132


>Z81571-7|CAB04620.1|  272|Caenorhabditis elegans Hypothetical
           protein M01G12.9 protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +1

Query: 592 LFDFFCRECSXEQKLALKIGEVPELLCQTML 684
           + D++  + + + K+ +KIGE+P++L +T L
Sbjct: 8   VIDYYHSKINKDSKMEIKIGELPKVLNKTYL 38


>U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical
           protein F53A9.6 protein.
          Length = 86

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
 Frame = +3

Query: 105 HSISSYRPPLLHQNQ---HYKSIWTFDLHAPYRRARHL*RQHGLQYCRHLQRVRHHHAN 272
           H    Y PP +H +    H+  + T   H  +    H    HG  Y  H +   HHH +
Sbjct: 25  HGAPGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYES-HHHHGH 82


>AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical
           protein Y18H1A.10 protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -2

Query: 129 EVYKMRWNGKP--LHFLPFQDNG 67
           EV+   WNG+P  +  LPF++NG
Sbjct: 118 EVFSTVWNGRPVAIKVLPFENNG 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,724,829
Number of Sequences: 27780
Number of extensions: 427958
Number of successful extensions: 1185
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)