Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_O09
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-2|CAB01886.1|  482|Caenorhabditis elegans Hypothetical pr...   278   3e-75
U00043-9|AAC77506.1|  474|Caenorhabditis elegans Temporarily ass...   278   4e-75
AC006723-6|AAF59425.1|  492|Caenorhabditis elegans Hypothetical ...    31   1.3  
AF022968-1|ABR92613.1|  219|Caenorhabditis elegans Protein carbo...    28   6.9  

>Z79601-2|CAB01886.1|  482|Caenorhabditis elegans Hypothetical
           protein K09A9.5 protein.
          Length = 482

 Score =  278 bits (682), Expect = 3e-75
 Identities = 127/162 (78%), Positives = 141/162 (87%)
 Frame = +2

Query: 251 KPAEKKVRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYT 430
           K  EK + NMILNFGPQHPAAHGVLRLVL+L+GE +  A PHIGLLHR TEKLIE+KTYT
Sbjct: 90  KQREKNLENMILNFGPQHPAAHGVLRLVLKLEGEVIIKAIPHIGLLHRATEKLIEHKTYT 149

Query: 431 QALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIMAVGTH 610
           QALPYFDRLDYVSMMCNEQ +SLAVEKLL ID+P RAKYIRTL  E+TR+ NHIM + TH
Sbjct: 150 QALPYFDRLDYVSMMCNEQAWSLAVEKLLGIDIPTRAKYIRTLMGELTRIQNHIMGITTH 209

Query: 611 ALDVGALTPFFWLFEERXKMMEFYERVSGARMHAAYIRPGGV 736
           ALDVGA+TPFFW+FEER K+ EF ERVSGARMHA Y+RPGGV
Sbjct: 210 ALDVGAMTPFFWMFEEREKLFEFSERVSGARMHANYVRPGGV 251



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = +1

Query: 679 LRESQRRQDARRLHQT--RRGSL--DMPLGLMDDIYEFSFE 789
           L E   R    R+H    R G +  D+P+GLMDDIY+++ +
Sbjct: 229 LFEFSERVSGARMHANYVRPGGVAWDLPIGLMDDIYDWAIK 269


>U00043-9|AAC77506.1|  474|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 99 protein.
          Length = 474

 Score =  278 bits (681), Expect = 4e-75
 Identities = 127/162 (78%), Positives = 141/162 (87%)
 Frame = +2

Query: 251 KPAEKKVRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYT 430
           K  EK + NMILNFGPQHPAAHGVLRLVL+L+GE +  A PHIGLLHR TEKLIE+KTYT
Sbjct: 82  KKREKNLENMILNFGPQHPAAHGVLRLVLKLEGEVIIKAIPHIGLLHRATEKLIEHKTYT 141

Query: 431 QALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIMAVGTH 610
           QALPYFDRLDYVSMMCNEQ +SLA+EKLL IDVP RAKYIR LF E+TR+ NHIM + TH
Sbjct: 142 QALPYFDRLDYVSMMCNEQAFSLAIEKLLGIDVPPRAKYIRILFGELTRIQNHIMGITTH 201

Query: 611 ALDVGALTPFFWLFEERXKMMEFYERVSGARMHAAYIRPGGV 736
           ALDVGA+TPFFW+FEER K+ EF ERVSGARMHA Y+RPGGV
Sbjct: 202 ALDVGAMTPFFWMFEEREKLFEFSERVSGARMHANYVRPGGV 243



 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +1

Query: 679 LRESQRRQDARRLHQT--RRGSL--DMPLGLMDDIYEFS 783
           L E   R    R+H    R G +  D+P+GLMDDIY+++
Sbjct: 221 LFEFSERVSGARMHANYVRPGGVAWDLPVGLMDDIYDWA 259


>AC006723-6|AAF59425.1|  492|Caenorhabditis elegans Hypothetical
           protein Y19D10B.6 protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +2

Query: 422 TYTQALPYF--DRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHI 592
           T T  L YF     +Y+S   + + +S AVE L N+++ L   +  +L+A I ++LN +
Sbjct: 92  TATVDLEYFFETHYEYISKKNDSEKFSFAVETLENVNLTLTNIFYNSLYANI-KVLNQL 149


>AF022968-1|ABR92613.1|  219|Caenorhabditis elegans Protein
           carboxymethyltransferaseprotein 1, isoform b protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 524 DVPLRAKYIRTLFAEITRLLNHIMAVGTHALDVGA 628
           D P R  Y  T  A +  L NH++A G  ALDVG+
Sbjct: 48  DAPQRIGYNATHAAALDYLQNHLVA-GAKALDVGS 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,068,160
Number of Sequences: 27780
Number of extensions: 408126
Number of successful extensions: 1040
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)