Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_O07
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 35 0.067
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.067
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 35 0.067
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.067
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 35 0.067
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 34 0.15
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 34 0.15
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.20
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.36
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 32 0.62
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 32 0.62
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 32 0.62
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 31 0.83
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 31 0.83
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 31 0.83
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 31 1.1
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 31 1.1
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 31 1.4
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 31 1.4
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 30 1.9
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 30 1.9
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 30 1.9
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.3
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.3
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 4.4
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.8
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 28 7.7
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 28 7.7
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 28 7.7
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 28 7.7
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 28 7.7
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 28 7.7
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 28 7.7
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 28 7.7
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 28 7.7
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 28 7.7
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 28 7.7
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 28 7.7
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 28 7.7
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 28 7.7
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLXWNAG 282
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 RVG 291
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLXWNAG 282
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 RVG 291
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLXWNAG 282
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 RVG 291
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLXWNAG 282
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 RVG 291
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLXWNAG 282
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 RVG 291
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLXWNAG 282
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 RVG 291
G
Sbjct: 130 LFG 132
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.15
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 163 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWN 276
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.15
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 163 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWN 276
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLX 270
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 271 W 273
W
Sbjct: 85 W 85
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 130 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNA 279
YD D+P + L +L+ + E E V + +L W D RL WNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 311 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSV 415
+S +LWRPDV+L N+ + + Y+ R VS+NG V
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDV 138
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 130 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNA 279
YD ++P + L +L+ ++E + + + ++ W D RL WNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLX 270
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++L
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 271 WNAGRVG 291
W+ G
Sbjct: 90 WDPVNYG 96
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLX 270
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++L
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 271 WNAGRVG 291
W+ G
Sbjct: 90 WDPVNYG 96
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLX 270
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++L
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 271 WNAGRVG 291
W+ G
Sbjct: 90 WDPVNYG 96
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V S+R+W PD+VL NA + V ++G V+W+
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWV 176
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V S+R+W PD+VL NA + V ++G V+W+
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWV 176
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWI 424
++WRPD++L N+A+ + V N G V+WI
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWI 83
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 61 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 234
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 235 DLQMNWIDKRLXWNAGRVGLQH 300
+ + W D L WN V ++
Sbjct: 77 EFLLRWYDPILHWNQSAVSYEN 98
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 82 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 255
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 256 DKRLXWN 276
D RL WN
Sbjct: 93 DDRLMWN 99
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 172 LTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNA 279
L +L+ ++E E V + +L W D RL WN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 311 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWI 424
SS+ +W+PDV+L N+AA + + G+V WI
Sbjct: 105 SSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWI 143
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLXWNA---GRVGLQHLAG 309
++ E + + ++ L +W+D RL WN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWI 424
R+W+PD++L+N A A + V+++G+V+W+
Sbjct: 193 RIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWL 229
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 315 EDTSQVLQPHSPCVPXQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 136
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 82 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 141
Query: 135 IVRCEERVD 109
I+ C R+D
Sbjct: 142 ILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 315 EDTSQVLQPHSPCVPXQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 136
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 135 IVRCEERVD 109
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 315 EDTSQVLQPHSPCVPXQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 136
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 135 IVRCEERVD 109
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 166 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLXWNAGRVGLQHL 303
VN+ L + H + E E T + + WID+ + W+A + + L
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKL 100
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 130 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNA 279
YD D+P + L L+ + E V + ++ W D RL WNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 145 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGRV-GLQHL 303
PP +++ + + + L+ ++ E E V D W D+RL WN G+ H+
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHI 103
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 184 LRHANIRESESTVRIQADLQMNWIDKRLXWNAGRVG 291
+R ++ E + L+M W D RL W+ GR G
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWG 94
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 178 LHLRHAN-IRESESTVRIQADLQMNWIDKRLXWN 276
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 76 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 240
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 241 QMNWIDKRLXWN 276
+ W D+ L WN
Sbjct: 81 ILQWKDEFLFWN 92
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 434 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPT 285
P A RRRS G RSPRR P A R+ S R+P + SP+
Sbjct: 461 PQAPRRRRSP---SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPS 507
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V+ E++W PD+VL NA + + + G+V W+
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 284 EWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+WG ++ + S+++W PD+VL NA A++ ++G V W
Sbjct: 96 DWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVW 143
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSW 421
G T + S+ +W PD+VL N AA L A V+ G+V W
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYW 152
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V+ E++W PD+VL NA + + + G+V W+
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V+ E++W PD+VL NA + + + G+V W+
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRIQADLQMNWIDKRLXWNAGRVG 291
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPIXMQLRQ 469
++W P+ ++N+ TT + + + NG+V WI RL + +P + LRQ
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQ 165
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPIXMQLRQ 469
++W P+ ++N+ TT + + + NG+V WI RL + +P + LRQ
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQ 165
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPIXMQLRQ 469
++W P+ ++N+ TT + + + NG+V WI RL + +P + LRQ
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQ 165
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRIQADLQMNWIDKRLXWNAGRVG 291
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPIXMQLRQ 469
++W P+ ++N+ TT + + + NG+V WI RL + +P + LRQ
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQ 165
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSW 421
G T + S+ +W PD+VL N AA L A V+ G+V W
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYW 152
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/79 (18%), Positives = 32/79 (40%)
Frame = +1
Query: 67 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 246
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 247 NWIDKRLXWNAGRVGLQHL 303
+W D + W+ + GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRIQADLQMNWIDKRLXWNAGRVG 291
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRIQADLQMNWIDKRLXWNAGRVG 291
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWI 424
+LW PDV++ N+A YA V NG V+W+
Sbjct: 106 QLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNWM 141
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 145 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGRV-GLQHL 303
PP +I + L++ ++ + E E D + +W D RL W+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,507,091
Number of Sequences: 27780
Number of extensions: 299448
Number of successful extensions: 973
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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