Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N24
(834 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 71 3e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 71 3e-12
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 56 5e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 56 6e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 56 6e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 55 1e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 54 3e-07
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 47 4e-05
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 44 2e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 40 0.006
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.017
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 37 0.039
AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA ... 30 3.4
BT023783-1|AAZ41792.1| 1072|Drosophila melanogaster LD13709p pro... 30 4.5
BT001505-1|AAN71260.1| 624|Drosophila melanogaster LD35838p pro... 30 4.5
AY071601-1|AAL49223.1| 1140|Drosophila melanogaster RE65203p pro... 30 4.5
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P... 30 4.5
AE014297-92|AAN13317.2| 742|Drosophila melanogaster CG9805-PB, ... 30 4.5
AE014297-91|AAF52126.1| 1140|Drosophila melanogaster CG9805-PA, ... 30 4.5
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 70.5 bits (165), Expect = 3e-12
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Frame = +2
Query: 191 MGVPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 370
+G P L I+++FL++R + + S+ R L AGVPQG +DIP++
Sbjct: 629 IGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQAT 688
Query: 371 PTQLALFADDTTVYYSSXNKSLIAKXLQS--AXLGQWFRKWRIXINPAKSTAV 523
L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 689 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 741
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 70.5 bits (165), Expect = 3e-12
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Frame = +2
Query: 191 MGVPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 370
+G P L I+++FL++R + + S+ R L AGVPQG +DIP++
Sbjct: 577 IGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQAT 636
Query: 371 PTQLALFADDTTVYYSSXNKSLIAKXLQS--AXLGQWFRKWRIXINPAKSTAV 523
L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 637 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 689
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 56.4 bits (130), Expect = 5e-08
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Frame = +2
Query: 218 IIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP-----PTQL 382
+++ +L R R +S+ + AGVPQG +D+P+ + L
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSML 671
Query: 383 ALFADDTTVYYSSXNKSLIAKXLQ--SAXLGQWFRKWRIXINPAKSTAVXXXXXXXXXXX 556
A FADD V Y S + A +Q + +W R+W I IN +KS V
Sbjct: 672 ATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNV----------- 720
Query: 557 XXXXXXNLTPPITLFXQPIPCARKVKYLGVTL 652
PP+ + P+P KYLGV L
Sbjct: 721 CFTLKRRTPPPVYIEEVPVPQPNAAKYLGVLL 752
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +3
Query: 609 PYPAPGRSSTWALPXNASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 770
P P P + + + +TF H+ +R R + + Y ++ RSK+S +
Sbjct: 738 PVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNK 791
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 56.0 bits (129), Expect = 6e-08
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Frame = +2
Query: 200 PDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIP-RSPPT 376
P L L+++ FL R+ V+G SS +P+ AGVPQG +D+P +P T
Sbjct: 608 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 667
Query: 377 Q-------LALFADDTTVYYSSXNKSLIAKXLQS--AXLGQWFRKWRIXINPAKSTAV 523
+ +A +ADDT V S + LQ QW W + IN K V
Sbjct: 668 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANV 725
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 56.0 bits (129), Expect = 6e-08
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Frame = +2
Query: 200 PDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIP-RSPPT 376
P L L+++ FL R+ V+G SS +P+ AGVPQG +D+P +P T
Sbjct: 410 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 469
Query: 377 Q-------LALFADDTTVYYSSXNKSLIAKXLQS--AXLGQWFRKWRIXINPAKSTAV 523
+ +A +ADDT V S + LQ QW W + IN K V
Sbjct: 470 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANV 527
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 55.2 bits (127), Expect = 1e-07
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 191 MGVPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 370
+ +P+S +++ +L +R R S+ + AGVPQG DIP +
Sbjct: 601 ISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNS 660
Query: 371 PTQLALFADDTTVYYSSXN--KSLIAKXLQSAXLGQWFRKWRIXINPAKSTAVXXXXXXX 544
++ FADDT + S + ++ L + +W WRI +N K V
Sbjct: 661 RLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFTLNRQ 720
Query: 545 XXXXXXXXXXNLTPPITLFXQPIPCARKVKYLGVTL 652
PP+ L P+P A +V YLGV L
Sbjct: 721 D-----------CPPLLLNSIPLPKADEVTYLGVHL 745
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 53.6 bits (123), Expect = 3e-07
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 12/207 (5%)
Frame = +2
Query: 218 IIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIP------RSPPTQ 379
+++ +L +R RV + S PR + AGVPQG D+P + P +
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRK 672
Query: 380 --LALFADDTTVYYSSXNKSLIAKXLQS--AXLGQWFRKWRIXINPAKSTAVXXXXXXXX 547
LA +ADD + YSS + A+ LQ L W ++W + +NP K+
Sbjct: 673 ALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKT---------IN 723
Query: 548 XXXXXXXXXNLTPPITLFXQPIPCARKVKYLGVTLXCIDDIPPAYKISP*PCRVYSR*TL 727
+T PI L + + KYLG+TL P K + C Y R
Sbjct: 724 PCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRC--YQRMQQ 781
Query: 728 PHDL*AE*N--VLRNKVALYKTCIKPV 802
L + LR K A+Y C+ P+
Sbjct: 782 LRWLLNRKSTMTLRAKRAVYVHCVAPI 808
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 46.8 bits (106), Expect = 4e-05
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Frame = +2
Query: 197 VPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 376
+P + +++ +L NR R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 377 QLALFADDTTVYYSS----XNKSLIAKXLQSAXLGQWFRKWRIXINPAKSTAVXXXXXXX 544
+ FADDT + S +L+++ L S + +W WRI IN K V
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTS--VERWLADWRISINVQKCKQV------- 711
Query: 545 XXXXXXXXXXNLTPPITLFXQPIPCARKVKYLGVTL 652
PP+ L IP A +V YLGV L
Sbjct: 712 ----TFTLNKQTCPPLVLNNICIPQADEVTYLGVHL 743
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 44.4 bits (100), Expect = 2e-04
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Frame = +2
Query: 197 VPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 376
+P + +++ +L N R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 377 QLALFADDTTVYYSS----XNKSLIAKXLQSAXLGQWFRKWRIXINPAKSTAVXXXXXXX 544
+ FADDT + S +L+++ L S + +W WRI IN K V
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTS--VERWLADWRISINVQKCKQV------- 711
Query: 545 XXXXXXXXXXNLTPPITLFXQPIPCARKVKYLGVTL 652
PP+ L IP A +V YLGV L
Sbjct: 712 ----TFTLNKQTCPPLVLNNICIPQADEVTYLGVHL 743
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +2
Query: 197 VPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 376
+P ++ +++ +L R R + SS + AGVPQG DIP +
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQL 201
Query: 377 QLALFADDTTVYYSSXNKSLIAKXLQSAXLGQW 475
+ FADDT + S ++ + +Q A W
Sbjct: 202 TIFTFADDTAII--SRSRCPVKTTMQLAYFFIW 232
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 37.9 bits (84), Expect = 0.017
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 194 GVPDSLGLIIRDFLSNRSIRYRVEGTLSSPRPLTAGVPQGXXXXXXXXXXXXNDI----P 361
G+ L +I+ F++NRS R R+ S+ L G+PQG DI
Sbjct: 605 GIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVT 664
Query: 362 RSPPTQLALFADDTTVYYSSXN 427
R ++L+ADD ++ N
Sbjct: 665 RHKDIYISLYADDAIIFTKIKN 686
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 36.7 bits (81), Expect = 0.039
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 221 IRDFLSNRSIRYRVEGTLSSPRPLTAGVPQG 313
I++F+SNR I RV SSP PL G+PQG
Sbjct: 606 IKNFMSNRKITVRVGPHTSSPLPLFNGIPQG 636
>AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA
protein.
Length = 972
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 534 GEAPHGFPPGLGGGI--SHPRLLSLXNPYPAPGRSSTWALPXNASMTFRPHI 683
G+ P G GLGGG+ + PR LS +P P P S P + S T P +
Sbjct: 816 GDPPGGGGGGLGGGVVENGPRSLS-SSPRPRPASHSPPTRPISMSPTTPPSL 866
>BT023783-1|AAZ41792.1| 1072|Drosophila melanogaster LD13709p protein.
Length = 1072
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 396 SANKANWVGGDRGISLTNKLNRRGERTEPCGTPAVRGRGEERVPS----TRYRIERFDKK 229
+A++ N GG+R ++ R GER E G RG +R + + +R+ R
Sbjct: 849 AASERNDRGGERIERGGERIERGGERLERGGERIERGGDRDRKDNEGADSSWRVRREPDS 908
Query: 228 SRMMSPRLSGTP 193
R +P+ SG P
Sbjct: 909 QRAAAPKDSGAP 920
>BT001505-1|AAN71260.1| 624|Drosophila melanogaster LD35838p
protein.
Length = 624
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 396 SANKANWVGGDRGISLTNKLNRRGERTEPCGTPAVRGRGEERVPS----TRYRIERFDKK 229
+A++ N GG+R ++ R GER E G RG +R + + +R+ R
Sbjct: 401 AASERNDRGGERIERGGERIERGGERLERGGERIERGGDRDRKDNEGADSSWRVRREPDS 460
Query: 228 SRMMSPRLSGTP 193
R +P+ SG P
Sbjct: 461 QRAAAPKDSGAP 472
>AY071601-1|AAL49223.1| 1140|Drosophila melanogaster RE65203p protein.
Length = 1140
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 396 SANKANWVGGDRGISLTNKLNRRGERTEPCGTPAVRGRGEERVPS----TRYRIERFDKK 229
+A++ N GG+R ++ R GER E G RG +R + + +R+ R
Sbjct: 917 AASERNDRGGERIERGGERIERGGERLERGGERIERGGDRDRKDNEGADSSWRVRREPDS 976
Query: 228 SRMMSPRLSGTP 193
R +P+ SG P
Sbjct: 977 QRAAAPKDSGAP 988
>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
isoform A protein.
Length = 1788
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +3
Query: 216 SSYGTSCRTALFDIESREPSPPRDLSQLESHKAQSSHPSYLAYSSTI 356
SS GT C TAL + P P S L H QS S A SST+
Sbjct: 897 SSAGTVC-TALMSGAASGPDVPERSSSLGKHSGQSRSQSTSASSSTL 942
>AE014297-92|AAN13317.2| 742|Drosophila melanogaster CG9805-PB,
isoform B protein.
Length = 742
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 396 SANKANWVGGDRGISLTNKLNRRGERTEPCGTPAVRGRGEERVPS----TRYRIERFDKK 229
+A++ N GG+R ++ R GER E G RG +R + + +R+ R
Sbjct: 519 AASERNDRGGERIERGGERIERGGERLERGGERIERGGDRDRKDNEGADSSWRVRREPDS 578
Query: 228 SRMMSPRLSGTP 193
R +P+ SG P
Sbjct: 579 QRAAAPKDSGAP 590
>AE014297-91|AAF52126.1| 1140|Drosophila melanogaster CG9805-PA,
isoform A protein.
Length = 1140
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 396 SANKANWVGGDRGISLTNKLNRRGERTEPCGTPAVRGRGEERVPS----TRYRIERFDKK 229
+A++ N GG+R ++ R GER E G RG +R + + +R+ R
Sbjct: 917 AASERNDRGGERIERGGERIERGGERLERGGERIERGGDRDRKDNEGADSSWRVRREPDS 976
Query: 228 SRMMSPRLSGTP 193
R +P+ SG P
Sbjct: 977 QRAAAPKDSGAP 988
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,564,757
Number of Sequences: 53049
Number of extensions: 812367
Number of successful extensions: 2396
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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