Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N22
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 33 0.38
07_01_0373 + 2783596-2784933 31 0.88
01_06_1224 - 35508842-35510404 31 0.88
02_04_0452 + 23044190-23045227 30 2.0
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 29 3.5
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 29 3.5
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.5
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 3.5
12_02_1174 - 26696869-26698191 29 4.7
10_08_0636 + 19478723-19478869,19479984-19480212,19480321-194804... 29 4.7
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 29 4.7
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 29 4.7
04_01_0041 - 464695-464850,467485-469029 29 6.2
01_05_0227 - 19512866-19514983 29 6.2
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 28 8.2
09_04_0109 - 14674980-14675004,14675861-14676468 28 8.2
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 8.2
05_03_0637 - 16465433-16466242 28 8.2
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 28 8.2
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 8.2
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 28 8.2
>06_03_1310 + 29238644-29240260
Length = 538
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = +2
Query: 476 AGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKE 655
A HPF S ++ P + P R+ L H+ P H PP+ P P P +P
Sbjct: 351 AAHPFDCSKAQCQATPPTTRRPGGRTPL--APHRSPLPHHMPPRRTPPTPPPPSSPTPSH 408
Query: 656 FAPGLKPPXSSXAHQRISPP 715
P PP S + + PP
Sbjct: 409 LPP--PPPTYSESPKSSMPP 426
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 92 EEEKALTKEGMAEAAETXKGTISSMNRS 9
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>01_06_1224 - 35508842-35510404
Length = 520
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = +2
Query: 521 PYASSH----PPLRS--RLHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPP 679
PY+ SH PPL+ L+ PD H PP P P + P EF GL PP
Sbjct: 25 PYSPSHADLSPPLQEVYSLYNPDDPPASETHLPPYAPPPAPVVSELPDDLEF--GLHPP 81
>02_04_0452 + 23044190-23045227
Length = 345
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 482 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQXPDSIHQPP 604
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 548 RSRLHQPDHQX-PDSIHQPPQ-T*HPFPSIP*TPYYKEFAPGLKPPXSSXAHQRISP--- 712
+++ QP + P + PPQ HP P P Y +A G+ PP + + + P
Sbjct: 5 QAQQQQPQYGFHPQAPPPPPQYPHHPPPYAAPLPQYAPYARGMPPPQAQQLYSHLPPHQQ 64
Query: 713 PRHWA 727
P H+A
Sbjct: 65 PPHFA 69
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 533 SHPPLRSRLHQPDHQXPDSIHQPP-QT*HPFPSIP*TPYYKEFAPGLKPP 679
S PPLRS QP P QPP T P + P +P K+ AP PP
Sbjct: 584 SPPPLRSPPRQPT-PPPSPSQQPPLPTPQPVQASPTSP-TKQHAPPAPPP 631
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 285 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 458
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 459 VEGVNVLATPSSSRITIGGLALMHQ 533
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +2
Query: 521 PYASSHPPLRSRLHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPXSSXAHQ 700
P S PP + H P Q P PP P PS+P P +AP +P + HQ
Sbjct: 284 PTLQSQPPSQYPGHLPHSQVPPV---PPSA--PVPSVPALPRDPYYAPPAQP--TETMHQ 336
Query: 701 RISPP 715
+ P
Sbjct: 337 QYQAP 341
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 521 PYASSHPPLRSRLH-QPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPP 679
P PP R+R +P H+ P QPP + P P P P P +KPP
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPP-PPPPPPPPPPPRPPSVKPP 173
>10_08_0636 +
19478723-19478869,19479984-19480212,19480321-19480414,
19480598-19480721,19480922-19481023,19481103-19481254,
19481353-19481446,19481642-19481827
Length = 375
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 602 PQT*HPFPSIP*TPYYKEFAPGL-KPPXSSXAHQRISPPRHWAWLK 736
P T P++P P + GL + P A RI+PP W W K
Sbjct: 4 PVTTRAAPAMPFAPQPRTAGGGLLRRPSPPAAALRIAPPLFWPWQK 49
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 535 PPSPAISATSTRSSNXRFHTPTTP-DLTSISINPLNAVLQGVRAGVKASV 681
PPS I A + + H TT D+ +++N LNA+ + V+AG + ++
Sbjct: 185 PPSKDIGAYLSEYVHYIAHGATTDSDVRVLALNTLNALKRSVKAGPRVTI 234
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Frame = +2
Query: 539 PPLRSRLHQPDHQXPDSI-HQPPQT*HPFPSIP*TPYYKEFAPGLKPPXSSXAHQRISPP 715
PP P+ PDS Q P T P P P + + L P + + PP
Sbjct: 50 PPSPGYSDSPEPPLPDSPPSQEPDTPEPAPPTPPQQQQQPWQSPLPPRREPAPPRTVVPP 109
Query: 716 RHWAWLKGVRPPYFQVN 766
+ W PP +N
Sbjct: 110 QEPGWSSVPPPPARVIN 126
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 422
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 423 TVD 431
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 463 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 371
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 28.3 bits (60), Expect = 8.2
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQXPDSIHQPPQT*---HPFPSIP*TPYYKEFAPGLKPPXSSXAHQ 700
SS PP ++ P P I +PP P P+ P P + P PP SS Q
Sbjct: 50 SSKPPPPTQTAPP---VPVVISEPPPPQPQPEPQPAAPSQPPPPQEQPSPPPPASSNTTQ 106
Query: 701 RISPPRHWAWLKGVRPPYF-QVNDESQXSRLIXRHSTHN 814
+ PP+ + +P + +++ + R T N
Sbjct: 107 QPPPPQQRQQSRAKKPAHIKRISSAGLQVESVLRRKTEN 145
>09_04_0109 - 14674980-14675004,14675861-14676468
Length = 210
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +2
Query: 485 PFILSHYYWRSRPYASSHPPLRSRLHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAP 664
P + + + R A+ PP R RL P +H PP F P +P + +
Sbjct: 32 PKVAASFALRPMVAAAVSPPPRHRLLLPPPPGRCLLHPPPTVAASFTHRPRSPPCLQNSK 91
Query: 665 GLKPPXSSXAHQR 703
PP S H R
Sbjct: 92 SGSPPPSHLHHAR 104
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXP-DSIHQPPQT*HPFPSIP*TPYY 649
S +A P LR H P H P H PP HP P P P++
Sbjct: 21 SHIFAPPPPHLRHPHHHPPHHHPHPPHHHPPHHPHP-PHHPHPPHH 65
>05_03_0637 - 16465433-16466242
Length = 269
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 527 ASSHPPLRSRLHQPDHQXPDSIHQP--PQT*HPFPSIP*TPYY 649
++S PPLR L +P H P HQP P P P P Y
Sbjct: 132 STSAPPLRPLLPRPPHLHPAFHHQPFHHHLLQPQPPPPPPPLY 174
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 557 LHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPXSSXAH 697
L QP HQ P H P P P+ P P AP +PP H
Sbjct: 253 LPQPQHQAPPPSHPPALPALPAPNAPPPP-----APQSQPPSQFPGH 294
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 237 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 417 PVTVDLCWTTADVTVEGVNVLATPSS 494
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 547 AISATSTRSSNXRFHTPTTP 606
A S+T+TR S R H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,838,325
Number of Sequences: 37544
Number of extensions: 493549
Number of successful extensions: 1404
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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