Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N22
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical ... 31 1.4
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.8
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.2
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 5.5
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 29 5.5
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 29 5.5
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 5.5
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 5.5
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 7.3
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 7.3
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 28 9.6
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 28 9.6
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 28 9.6
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 28 9.6
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical
protein E04A4.1 protein.
Length = 333
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 568 RSSNXRFHTPTTPDLTSISINPLNAVLQGVRAGVKA 675
+SSN FH DL S+ NA LQ R G+KA
Sbjct: 17 KSSNYVFHRMLVADLIGFSLTSKNAKLQTKRLGLKA 52
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 521 PYASSHPPLRSRLHQPDHQXPDS 589
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 359
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTQRLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTQRLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +2
Query: 560 HQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPP--XSSXAHQRISPPRHWAWL 733
+QP + P + +QPP PFP TPYY + G+ P S + + PP
Sbjct: 4 NQPPNYPPGNPNQPP----PFPP---TPYYPMYQAGMPMPYIPQSPQYPQPGPP------ 50
Query: 734 KGVRPPY--FQVNDESQXSRLIXRHSTHNPVSLPQITP 841
G PP+ Q+ E S+ P +P + P
Sbjct: 51 -GGPPPFMGIQIKQEPMWSQENRYGMQAGPSGMPGMPP 87
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPXSSXA 694
++P ASSH P P +Q P PP P++ + + AP PP +S
Sbjct: 1219 AKPEASSHAPTPPPQPHPSYQAP----APP------PALSVFQHSPQGAPITAPPPASSH 1268
Query: 695 HQRISPPR 718
H+ I+ P+
Sbjct: 1269 HEHIAAPQ 1276
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPXSSXA 694
++P ASSH P P +Q P PP P++ + + AP PP +S
Sbjct: 1239 AKPEASSHAPTPPPQPHPSYQAP----APP------PALSVFQHSPQGAPITAPPPASSH 1288
Query: 695 HQRISPPR 718
H+ I+ P+
Sbjct: 1289 HEHIAAPQ 1296
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTQRLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 562 STRSSNXRFHTPTTPDLTSISINPLNAVLQGVRAGVKASVXIXXSSAYLTPSSL 723
S +S PT P SI+ +P+ ++ + ++A K+ SS+ + P+SL
Sbjct: 707 SDKSQLTSLSLPTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIPPNSL 760
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 562 STRSSNXRFHTPTTPDLTSISINPLNAVLQGVRAGVKASVXIXXSSAYLTPSSL 723
S +S PT P SI+ +P+ ++ + ++A K+ SS+ + P+SL
Sbjct: 707 SDKSQLTSLSLPTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIPPNSL 760
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXPDSIHQP-PQT*HPFPSIP 634
S + +++ L S P HQ P S+HQP P + F + P
Sbjct: 33 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP 73
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXPDSIHQP-PQT*HPFPSIP 634
S + +++ L S P HQ P S+HQP P + F + P
Sbjct: 30 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP 70
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXPDSIHQP-PQT*HPFPSIP 634
S + +++ L S P HQ P S+HQP P + F + P
Sbjct: 39 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP 79
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQXPDSIHQP-PQT*HPFPSIP 634
S + +++ L S P HQ P S+HQP P + F + P
Sbjct: 32 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,080,863
Number of Sequences: 27780
Number of extensions: 365782
Number of successful extensions: 1097
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -