Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N21
(906 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 8e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 5e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 52 1e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 51 2e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 50 2e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 7e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 7e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 7e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.019
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.41
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 5.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVXSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTF 533
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 TFGS 545
FGS
Sbjct: 168 KFGS 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 8e-10
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFG 542
PD+VL NA A +A + + G V W + + ++ +P D TC FG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 543 S 545
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.2 bits (127), Expect = 8e-10
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
V W + + ++ +P D TC FGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 53.6 bits (123), Expect = 2e-09
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLW 362
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 363 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTF 539
PD+VL N A G + +A + G V W + + + +P D TC F
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 540 GS 545
GS
Sbjct: 164 GS 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.8 bits (121), Expect = 4e-09
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V++NGS ++ + + + +P D C FGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.8 bits (121), Expect = 4e-09
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V++NGS ++ + + + +P D C FGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTF 533
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+ TC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 534 TFGS 545
GS
Sbjct: 170 KLGS 173
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V++NGS ++ + + + +P D C FGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.4 bits (120), Expect = 5e-09
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSN 437
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G VSW + + ++ +P D +C FGS
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 51.6 bits (118), Expect = 1e-08
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V+++GS ++ + M + +P D C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V+++GS ++ + M + +P D C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 51.2 bits (117), Expect = 1e-08
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 336 WLVXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 503
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 504 WPNDMHTCTFTFGS 545
+P D TC FGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 50.8 bits (116), Expect = 2e-08
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 192 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLW 362
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 363 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTF 533
PD+ + N+ T G V ++GSVS + + + +WP D H C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 534 TFGS 545
FGS
Sbjct: 186 NFGS 189
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V+++GS ++ + + + +P D C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 50.4 bits (115), Expect = 2e-08
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVXSERLWRPDVVLLNAAAT---TA 404
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
R+ +G V + RL I M L+N+P D C FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V+++GS ++ + + + +P D C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
G Y V+++GS ++ + + + +P D C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 447 VSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
++ + + + +P D C FGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 7e-08
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Frame = +3
Query: 177 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV 344
LP H K VV + +R + E + + + +W D RLS+ S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 345 XSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPND 515
ER+WRPD N + + R+S +G + + RL I M+L N+P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 516 MHTCTFTFGS 545
+C GS
Sbjct: 173 RQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFGS 545
+L N A + VS+ G V W+ + + ++ +P D C + S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 42.3 bits (95), Expect = 6e-06
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = +3
Query: 201 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVV 377
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 378 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMHTCTFTFGS 545
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.7 bits (86), Expect = 7e-05
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDY 413
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCT 530
R R+S +GSV++ R + M L +P D CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVXSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 QLDNWPNDMHTCTFTFGS 545
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVXSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 QLDNWPNDMHTCTFTFGS 545
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVXSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 QLDNWPNDMHTCTFTFGS 545
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.019
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +3
Query: 195 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVXSERLWRP 368
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 369 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMHTCTFTFG 542
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 543 S 545
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.41
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +3
Query: 195 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVXSER 356
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMH 521
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 522 TC 527
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 5.1
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMH 521
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TC 527
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 746 PPPWXXXPPXSPXGXPXSXXP 808
P P PP P G P S P
Sbjct: 40 PNPSQGPPPGGPPGAPPSQNP 60
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 338 PSAAAPFPCVPTQS 297
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,625
Number of Sequences: 438
Number of extensions: 4541
Number of successful extensions: 76
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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