Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_N19
         (972 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038614-9|AAB92062.2|  445|Caenorhabditis elegans Hypothetical ...    35   0.10 
Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AL110479-15|CAB54361.2|  400|Caenorhabditis elegans Hypothetical...    31   0.94 
AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical ...    31   0.94 
AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical ...    31   0.94 
AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical ...    31   0.94 
AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical ...    31   0.94 

>AF038614-9|AAB92062.2|  445|Caenorhabditis elegans Hypothetical
           protein F15E6.2 protein.
          Length = 445

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 14/75 (18%), Positives = 30/75 (40%)
 Frame = +3

Query: 102 SAXECENATXLSXMIDSLLATYDRESPPDSKIVXXLTXHLRHANXXESQSTVRILSDLQL 281
           S   C+       +   +  TY   +   +K+V   +  + +    E +  V++     L
Sbjct: 54  SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113

Query: 282 NWIDXXLNWXAGEWG 326
           +W D  ++W   +WG
Sbjct: 114 SWNDTMVSWDKEQWG 128


>Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 141 MIDSLLATYDRESPPDSKIVXXLTXHLRHA-NXXESQSTVRILSDLQLNWIDXXLNWXAG 317
           + + LL+ ++  +PPD  +       L H     E + T+ +L  +  +W+D  L W   
Sbjct: 70  LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129

Query: 318 EWGCMT 335
            +G +T
Sbjct: 130 LFGGIT 135


>Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 141 MIDSLLATYDRESPPDSKIVXXLTXHLRHA-NXXESQSTVRILSDLQLNWIDXXLNWXAG 317
           + + LL+ ++  +PPD  +       L H     E + T+ +L  +  +W+D  L W   
Sbjct: 70  LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129

Query: 318 EWGCMT 335
            +G +T
Sbjct: 130 LFGGIT 135


>AL110479-15|CAB54361.2|  400|Caenorhabditis elegans Hypothetical
           protein Y105C5B.16 protein.
          Length = 400

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +3

Query: 165 YDRESPPDSKIVXXLTXHLRHANXXESQSTVRILSDLQLNWIDXXLNWXAGEW 323
           YD E+P        L  +L+     E Q  + ++ ++   W D  L+W A  W
Sbjct: 64  YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAW 115


>AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 141 MIDSLLATYDRESPPDSKIVXXLTXHLRHA-NXXESQSTVRILSDLQLNWIDXXLNWXAG 317
           + + LL+ ++  +PPD  +       L H     E + T+ +L  +  +W+D  L W   
Sbjct: 70  LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129

Query: 318 EWGCMT 335
            +G +T
Sbjct: 130 LFGGIT 135


>AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 141 MIDSLLATYDRESPPDSKIVXXLTXHLRHA-NXXESQSTVRILSDLQLNWIDXXLNWXAG 317
           + + LL+ ++  +PPD  +       L H     E + T+ +L  +  +W+D  L W   
Sbjct: 70  LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129

Query: 318 EWGCMT 335
            +G +T
Sbjct: 130 LFGGIT 135


>AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 141 MIDSLLATYDRESPPDSKIVXXLTXHLRHA-NXXESQSTVRILSDLQLNWIDXXLNWXAG 317
           + + LL+ ++  +PPD  +       L H     E + T+ +L  +  +W+D  L W   
Sbjct: 70  LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129

Query: 318 EWGCMT 335
            +G +T
Sbjct: 130 LFGGIT 135


>AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 141 MIDSLLATYDRESPPDSKIVXXLTXHLRHA-NXXESQSTVRILSDLQLNWIDXXLNWXAG 317
           + + LL+ ++  +PPD  +       L H     E + T+ +L  +  +W+D  L W   
Sbjct: 70  LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129

Query: 318 EWGCMT 335
            +G +T
Sbjct: 130 LFGGIT 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,733,152
Number of Sequences: 27780
Number of extensions: 122029
Number of successful extensions: 248
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)