Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_N18
         (850 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    42   0.001
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    42   0.001
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    42   0.001
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    41   0.002
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    41   0.002
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot...    30   4.6  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +1

Query: 709 MRYVAAYLLAVLGGXTTPXAADVEKI 786
           MRYVAAYLLAVLGG  +P  +D+EKI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKI 26


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +1

Query: 709 MRYVAAYLLAVLGGXTTPXAADVEKI 786
           MRYVAAYLLAVLGG  +P  +D+EKI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKI 26


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +1

Query: 709 MRYVAAYLLAVLGGXTTPXAADVEKI 786
           MRYVAAYLLAVLGG  +P  +D+EKI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKI 26


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 709 MRYVAAYLLAVLGGXTTPXAADVEKI 786
           MRYVAAYLLAVLGG  +P   D+EKI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKI 26


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 709 MRYVAAYLLAVLGGXTTPXAADVEKI 786
           MRYVAAYLLAVLGG  +P   D+EKI
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKI 26


>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
           protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 278 SRNPLRSVQRLTCRSNQP*KWMALXR 355
           SRNPLR +QRL   +  P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,309,788
Number of Sequences: 53049
Number of extensions: 716959
Number of successful extensions: 1507
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)