Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N08
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 32 2.4
AJ003080-1|CAA05853.1| 238|Homo sapiens serotonin receptor prot... 32 3.2
L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine recep... 31 4.2
BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid... 31 4.2
BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid... 31 4.2
BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid... 31 4.2
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 31 7.4
X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine recept... 31 7.4
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 31 7.4
U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B... 31 7.4
U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2 ... 31 7.4
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 31 7.4
CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein. 31 7.4
BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha... 31 7.4
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 31 7.4
AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2... 31 7.4
AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2... 31 7.4
AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha ... 31 7.4
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 31 7.4
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 30 9.8
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 30 9.8
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 30 9.8
S82612-1|AAB37533.2| 478|Homo sapiens 5-hydroxytryptamine type ... 30 9.8
D49394-1|BAA08387.1| 478|Homo sapiens serotonin 5-HT3 receptor ... 30 9.8
BT007204-1|AAP35868.1| 484|Homo sapiens 5-hydroxytryptamine (se... 30 9.8
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 30 9.8
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 30 9.8
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 30 9.8
BC004453-1|AAH04453.2| 478|Homo sapiens 5-hydroxytryptamine (se... 30 9.8
BC002354-1|AAH02354.1| 478|Homo sapiens 5-hydroxytryptamine (se... 30 9.8
AJ005205-1|CAA06442.3| 478|Homo sapiens serotonin 3 receptor pr... 30 9.8
AJ003079-1|CAA05852.1| 478|Homo sapiens 5-hydroxytryptamine3 re... 30 9.8
AJ003078-1|CAA05851.1| 510|Homo sapiens serotonin receptor prot... 30 9.8
AF498984-1|AAM21131.1| 478|Homo sapiens 5-hydroxytryptamine rec... 30 9.8
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 30 9.8
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +2
Query: 41 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---R 205
P LL +A + ++ L+ YD P + VVN++L L N+
Sbjct: 7 PLLLLLLLAVCLGAQGRNQEERLLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 206 ESESTVRILADLQMNWIDKRLXWN 277
E E + ++M W D RL W+
Sbjct: 67 EREEALTTNVWIEMQWCDYRLRWD 90
>AJ003080-1|CAA05853.1| 238|Homo sapiens serotonin receptor
protein.
Length = 238
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMHNS 528
K L + T S+ + N+P D+Q C+ F S +H S
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTS 182
>L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine receptor
alpha-5-subunit protein.
Length = 462
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGSTMHNSDE 534
RL IS MQL+++P D C FGS + + E
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSE 200
>BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGSTMHNSDE 534
RL IS MQL+++P D C FGS + + E
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSE 200
>BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGSTMHNSDE 534
RL IS MQL+++P D C FGS + + E
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSE 200
>BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5, precursor protein.
Length = 462
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGSTMHNSDE 534
RL IS MQL+++P D C FGS + + E
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSE 200
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 38 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 202
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 203 RESESTVRILADLQMNWIDKRLXWNAGXMG 292
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine receptor
protein.
Length = 452
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 38 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 202
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 203 RESESTVRILADLQMNWIDKRLXWNAGXMG 292
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B
subunit protein.
Length = 360
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 360
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 38 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 202
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 203 RESESTVRILADLQMNWIDKRLXWNAGXMG 292
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein.
Length = 452
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha 2
protein.
Length = 452
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 38 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 202
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 203 RESESTVRILADLQMNWIDKRLXWNAGXMG 292
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2
subunit B protein.
Length = 452
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2
subunit A protein.
Length = 452
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 452
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTF---NFGSTMHN 525
RL ++ M L N+P D+QTCT +FG TM++
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMND 199
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 38 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 202
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 203 RESESTVRILADLQMNWIDKRLXWNAGXMG 292
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 70 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 106
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>S82612-1|AAB37533.2| 478|Homo sapiens 5-hydroxytryptamine type 3AS
receptor subunit protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>D49394-1|BAA08387.1| 478|Homo sapiens serotonin 5-HT3 receptor
protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>BT007204-1|AAP35868.1| 484|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 3A protein.
Length = 484
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 155 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 186
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC004453-1|AAH04453.2| 478|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 3A protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>BC002354-1|AAH02354.1| 478|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 3A protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>AJ005205-1|CAA06442.3| 478|Homo sapiens serotonin 3 receptor
protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>AJ003079-1|CAA05852.1| 478|Homo sapiens 5-hydroxytryptamine3
receptor protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>AJ003078-1|CAA05851.1| 510|Homo sapiens serotonin receptor
protein.
Length = 510
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>AF498984-1|AAM21131.1| 478|Homo sapiens 5-hydroxytryptamine
receptor 3A protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 427 KRLDISTPISMQLDNWPNDMQTCTFNFGSTMH 522
K L + T S+ + N+P D+Q C+ F S +H
Sbjct: 149 KPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH 180
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 416
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,554,188
Number of Sequences: 237096
Number of extensions: 2753639
Number of successful extensions: 5561
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5542
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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