Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N08
(892 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 33 0.53
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 33 0.53
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 33 0.53
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 33 0.53
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 33 0.53
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 33 0.53
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 30 3.7
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 30 3.7
AE014298-1765|AAF48161.1| 1545|Drosophila melanogaster CG11245-P... 30 3.7
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 30 3.7
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 30 3.7
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 30 3.7
AY069605-1|AAL39750.1| 384|Drosophila melanogaster LD36528p pro... 30 4.9
AE013599-1612|AAF58441.1| 384|Drosophila melanogaster CG3850-PA... 30 4.9
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 29 8.6
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 29 8.6
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G YA V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G YA V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G YA V NNGS
Sbjct: 115 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G YA V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G YA V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G YA V NNGS
Sbjct: 118 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ R+W+PDV++ N+A G Y V NNGS
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ R+W+PDV++ N+A G Y V NNGS
Sbjct: 388 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 423
>AE014298-1765|AAF48161.1| 1545|Drosophila melanogaster CG11245-PA
protein.
Length = 1545
Score = 30.3 bits (65), Expect = 3.7
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 342 VLLNAAATTAGDYALRARVSNNGSVSXHEALGH*HSNFYAVRQLAQRHADLHVQLRFY 515
V+ +AAA A D A A S + + S E +G+ S F V LAQ D+ +L Y
Sbjct: 1252 VVASAAAAAATDAAADATTSLSSNNSCGEGVGNNLSKFATVSNLAQCLRDVDAELDDY 1309
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ R+W+PDV++ N+A G Y V NNGS
Sbjct: 340 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 375
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ R+W+PDV++ N+A G Y V NNGS
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ R+W+PDV++ N+A G Y V NNGS
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AY069605-1|AAL39750.1| 384|Drosophila melanogaster LD36528p
protein.
Length = 384
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 590 DVTDLSXWGAXPXNRGXVEPPVGNGXXMFXPXNPPP 697
D+ S + + P +RG EPP+G F P N PP
Sbjct: 2 DIIQKSIFNSGPHSRGIYEPPLG----YFTPYNTPP 33
>AE013599-1612|AAF58441.1| 384|Drosophila melanogaster CG3850-PA
protein.
Length = 384
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 590 DVTDLSXWGAXPXNRGXVEPPVGNGXXMFXPXNPPP 697
D+ S + + P +RG EPP+G F P N PP
Sbjct: 2 DIIQKSIFNSGPHSRGIYEPPLG----YFTPYNTPP 33
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 68 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 217
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 68 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 217
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,499,381
Number of Sequences: 53049
Number of extensions: 835571
Number of successful extensions: 1803
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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