Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N08
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.005
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 32 0.008
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 31 0.014
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.025
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.057
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.057
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.075
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.17
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.23
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.30
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.30
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.30
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.30
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.30
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.30
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 26 0.40
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.40
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.40
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.53
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.53
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.9
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 244
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKRLXWNA 280
+ W L W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 26.2 bits (55), Expect = 0.40
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 472 WPNDMQTCTFNFGSTMHNSDE 534
WP D+ CT + S H S+E
Sbjct: 166 WPYDILNCTIHIASWSHGSNE 186
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 31.9 bits (69), Expect = 0.008
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKRLXWNAG 283
+D+RL + G
Sbjct: 62 VDRRLAFQGG 71
Score = 29.9 bits (64), Expect = 0.033
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGS 513
RL I M L+N+P D Q C FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.014
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 469 NWPNDMQTCTFNFGSTMHNSDE-NGFRD 549
+WP D C NFGS +H+ +E N F D
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLD 202
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.025
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 22.2 bits (45), Expect = 6.5
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +2
Query: 38 YPFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 202
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 203 RESESTVRILADLQMNWIDKRLXWNAGXMG 292
E + L++ W D + WN G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.057
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 271
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 272 WNAGXMG 292
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.057
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 271
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 272 WNAGXMG 292
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.075
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAA 359
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFNFGS 513
+ ++ +P D QTC FGS
Sbjct: 147 IDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 454 SMQLDNWPNDMQTCTFNFGS 513
S+ ++ +P D+QTC GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFNFGS 513
+ ++ +P D QTC FGS
Sbjct: 155 IDVEYFPFDEQTCVLKFGS 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFNFGSTMHNSDENGFRD*XKNIQYVRVXXVGCD 597
+ ++ +P D QTC FGS ++ + R I+ V +G D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRH-IDEIRGKNVVDIGVD 196
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.23
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 285 EWGCSTWL-VSSERLWRPDVVLLNAA 359
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 472 WPNDMQTCTFNFGS 513
+P D QTC FGS
Sbjct: 152 FPFDQQTCFMKFGS 165
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 26.6 bits (56), Expect = 0.30
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGS 513
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 318 ERLWRPDVVLLN 353
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.2 bits (55), Expect = 0.40
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +1
Query: 424 MKRLDISTPISMQLDNWPNDMQTCTFNFGSTMHNSDE 534
M +L + +M+ +++P+D Q C+ S H + +
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQD 159
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 26.2 bits (55), Expect = 0.40
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 472 WPNDMQTCTFNFGSTMHNSDE 534
+P D QTC FGS N D+
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQ 178
Score = 25.0 bits (52), Expect = 0.93
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALR 389
+++W+PD+VL N A G+Y +R
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVR 126
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGXMG 292
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.40
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAA 359
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFNFGSTMHN 525
+ ++ +P D Q+C FGS +N
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYN 182
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 0.53
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFNFGSTMHN 525
RL + ++L+ +P D+Q C F S HN
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHN 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.53
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 424 MKRLDISTPISMQLDNWPNDMQTCTFNFGSTMHNSDENGFR 546
M +L + +M +P+D Q C S H +DE F+
Sbjct: 154 MVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQ 194
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 475 PNDMQTCTFNFGSTMHNSDENGFRD*XKNIQYVR 576
P D++ F +G H + N ++ KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 254 IDKRL 268
D RL
Sbjct: 68 TDPRL 72
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 103 GQ*CCVFAFCRTSYSTSEEKRVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,840
Number of Sequences: 438
Number of extensions: 5295
Number of successful extensions: 55
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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