Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_N06
         (854 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU007841-2|ABS57760.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
EF184600-2|ABO39479.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
EF184598-2|ABO39453.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
EF177442-2|ABL73700.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
DQ112752-2|AAZ00645.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
AY963573-2|AAX53686.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
AY777867-1|AAV72681.1|  117|Homo sapiens NADH dehydrogenase subu...    30   9.3  
AY495267-2|AAR94798.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
AY289060-2|AAP47998.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  
AF346993-2|AAK17598.1|  347|Homo sapiens NADH dehydrogenase subu...    30   9.3  

>EU007841-2|ABS57760.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>EF184600-2|ABO39479.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>EF184598-2|ABO39453.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>EF177442-2|ABL73700.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>DQ112752-2|AAZ00645.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>AY963573-2|AAX53686.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>AY777867-1|AAV72681.1|  117|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 117

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>AY495267-2|AAR94798.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>AY289060-2|AAP47998.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


>AF346993-2|AAK17598.1|  347|Homo sapiens NADH dehydrogenase subunit
           2 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 190 YLVEHASKTMSLLIPDLINNMLS*QFTLT 104
           Y +  A+ +M LL+  L+NNMLS Q+T+T
Sbjct: 59  YFLTQATASMILLMAILLNNMLSGQWTMT 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,435,688
Number of Sequences: 237096
Number of extensions: 1932301
Number of successful extensions: 10905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10905
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)