Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_N06
         (854 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    42   8e-04
AY071205-1|AAL48827.1|  184|Drosophila melanogaster RE24565p pro...    29   8.1  
AE013599-1925|AAF58228.3|  437|Drosophila melanogaster CG12863-P...    29   8.1  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 303 NTXXGTPQERECXIRKSCNNVS--VTSMEDMXHEEIVTSYVLAHVAQFDCRRHHMAFTNG 476
           N     P   EC    +   V+   T   +M  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 477 NTTRNKLLQEIKA 515
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>AY071205-1|AAL48827.1|  184|Drosophila melanogaster RE24565p
           protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 806 GHXDFRCVNFSSPRKLACFXVCLLAGARSHR 714
           GH + +C NF   RK      CLL G R+HR
Sbjct: 130 GHIETKCPNFRK-RKTNYTKGCLLCGKRNHR 159


>AE013599-1925|AAF58228.3|  437|Drosophila melanogaster CG12863-PA
           protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 806 GHXDFRCVNFSSPRKLACFXVCLLAGARSHR 714
           GH + +C NF   RK      CLL G R+HR
Sbjct: 383 GHIETKCPNFRK-RKTNYTKGCLLCGKRNHR 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,569,194
Number of Sequences: 53049
Number of extensions: 564585
Number of successful extensions: 982
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)