Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N05
(849 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 63 3e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 63 4e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 60 3e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 5e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 5e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 1e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.004
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.67
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 6.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.2
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 63.3 bits (147), Expect = 3e-12
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Frame = +3
Query: 6 ALGIASIDQLS*NVDDLYYSCYPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPD 185
ALG Q S ++++ + +LL C ++ T+L + L YD P
Sbjct: 8 ALGFLLFWQNSASLENDNEFGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPI 62
Query: 186 S--KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 350
S +I N+T+ L + + S + + + + + W D LSW ++ G + V S+
Sbjct: 63 SSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSD 122
Query: 351 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXT 521
+W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 123 DIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHR 182
Query: 522 CTFKFGSXMHNSDEMDFVIDXRIYSM 599
C FGS +H+ +E++ +D + + M
Sbjct: 183 CRINFGSWVHSGEEVNIFLDKKGFHM 208
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.9 bits (146), Expect = 4e-12
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Frame = +3
Query: 93 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 251
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 252 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 425
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 426 VSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
+ G V + + + +P D TC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 302
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDIST 476
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 477 PISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
+ + +P D C KFGS ++ +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 302
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDIST 476
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 477 PISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
+ + +P D C KFGS ++ +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 401
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
G Y V++NGS + + + + +P D C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
G Y V+++GS + + M + +P D C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 60.1 bits (139), Expect = 3e-11
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 284
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 285 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXI 455
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 456 KRLDISTPISMQLDNWPNDMXTCTFKFGS 542
RL I M L+N+P D C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 59.7 bits (138), Expect = 3e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
G Y V+++GS + + M + +P D C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
G Y V+++GS + + + + +P D C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 58.8 bits (136), Expect = 6e-11
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Frame = +3
Query: 111 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 275
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 276 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 446
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 447 SXIKRLDISTPISMQLDN--WPNDMXTCTFKFGSXMHNSDEM 566
+ TP+ + D+ WP D+ CT S H S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.8 bits (136), Expect = 6e-11
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +3
Query: 111 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 269
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 270 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 443
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 444 VSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
V + + ++ +P D TC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
G Y V+++GS + + + + +P D C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFVI 578
G Y V+++GS + + + + +P D C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.4 bits (135), Expect = 8e-11
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 302
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLD 467
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 468 ISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
+ + ++ +P D +C KFGS +N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.0 bits (134), Expect = 1e-10
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 362
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 363 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTF 530
PD+VL N A G+Y +R + + NG V + + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 531 KFGSXMHNSDEMDFVI 578
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Frame = +3
Query: 138 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIST 476
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 477 PISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
+ ++ +P D TC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 5e-10
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 12/175 (6%)
Frame = +3
Query: 81 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 239
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 240 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 416
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 417 ----RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
+A + + G V + + ++ +P D TC KFGS ++ +D
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.6 bits (128), Expect = 5e-10
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Frame = +3
Query: 69 YPFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 233
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 234 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GD 407
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 408 YALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
Y V NNG+ + + + + +P D C KFGS ++ ++D
Sbjct: 124 YPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.4 bits (125), Expect = 1e-09
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLD 467
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 468 ISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMD 569
+ S+ ++ +P D+ TC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +3
Query: 126 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 290
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 291 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 461
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 462 LDISTPISMQLDNWPNDMXTCTFKFGS 542
L I M+L N+P D +C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Frame = +3
Query: 192 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 368
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 369 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGS 542
+L N A + VS+ G V + + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 543 XMHNSDEMD 569
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 284
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 285 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 437
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 438 GSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGS 542
GS++ RL I+ M L +P D C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 284
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 285 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 437
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 438 GSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFGS 542
GS++ RL I+ M L +P D C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.9 bits (84), Expect = 1e-04
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Frame = +3
Query: 141 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 308
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 309 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTP 479
E + +E++W PD N + D R R+S +GSV+ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 480 ISMQLDNWPNDMXTCTFKFGS 542
M L +P D CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +3
Query: 114 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 278
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 279 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 449
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 450 XIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFV 575
+ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +3
Query: 114 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 278
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 279 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 449
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 450 XIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFV 575
+ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +3
Query: 114 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 278
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 279 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 449
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 450 XIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMHNSDEMDFV 575
+ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 348 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMX 518
+ +WRPD NA + T + + + ++ + +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 519 TCTFKFGSXMHNSDEMDFVID 581
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.010
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Frame = +3
Query: 192 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 365
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 366 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFKFG 539
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 540 SXMHNSDEMDFV 575
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.67
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 11/136 (8%)
Frame = +3
Query: 192 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 353
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 354 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPNDMX 518
LW+PD LNA + AL + S+ N +V R+ M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 519 TCTFKFGSXMHNSDEM 566
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 103 RQNAKTQHHCPS*STRSSQRTIES 174
++ +K HHC + + +Q IES
Sbjct: 59 KEKSKNNHHCNQDTEKLNQLEIES 82
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 335 PSAAAPFPCVPTQS 294
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,241
Number of Sequences: 438
Number of extensions: 4628
Number of successful extensions: 74
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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