Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_N04
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2305|AAF53265.1|  166|Drosophila melanogaster CG15480-P...    32   0.86 
BT003538-1|AAO39542.1|  995|Drosophila melanogaster RE07016p pro...    29   8.1  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.1  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.1  
AE014134-2415|AAF53343.2|  995|Drosophila melanogaster CG31811-P...    29   8.1  

>AE014134-2305|AAF53265.1|  166|Drosophila melanogaster CG15480-PA
           protein.
          Length = 166

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 27/103 (26%), Positives = 43/103 (41%)
 Frame = +3

Query: 516 RPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIPLNAVLQGVRAGVKASVVIRGS 695
           RPYA S    R R  + + ++     QP    H  P  P     Q  +  + A+ V    
Sbjct: 53  RPYALSENTPRKRRQETEREVQQMQEQPLYHHHSLPPTPPTTPPQHQQHPLPATQVPVTQ 112

Query: 696 ISVSHPLVTGHG*RGFAPLIFK*MMNHKLRALLVVIPRIXRFP 824
           I V+H  V  H  + +A ++ K     ++R LL + P    +P
Sbjct: 113 IPVTHSPVFNH--QAYAYMLQKQRAVLQMRQLLNINPDANTWP 153


>BT003538-1|AAO39542.1|  995|Drosophila melanogaster RE07016p
           protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +3

Query: 492 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIPLNAVLQGVRAGVK 671
           +S+Y+  S P+A SHP  +   +Q  +   + +  P +  H  P+   +A   G  +   
Sbjct: 1   MSNYHPHSHPHALSHPHPQQVHNQLQNPHQNQLPPPQRHNHAAPTAAASA--SGAPSS-S 57

Query: 672 ASVVIRGSISVSHP 713
           AS     SI V+HP
Sbjct: 58  ASASASASILVAHP 71


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014134-2415|AAF53343.2|  995|Drosophila melanogaster CG31811-PB,
           isoform B protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +3

Query: 492 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIPLNAVLQGVRAGVK 671
           +S+Y+  S P+A SHP  +   +Q  +   + +  P +  H  P+   +A   G  +   
Sbjct: 1   MSNYHPHSHPHALSHPHPQQVHNQLQNPHQNQLPPPQRHNHAAPTAAASA--SGAPSS-S 57

Query: 672 ASVVIRGSISVSHP 713
           AS     SI V+HP
Sbjct: 58  ASASASASILVAHP 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,674,174
Number of Sequences: 53049
Number of extensions: 859708
Number of successful extensions: 3042
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3037
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)