Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N01
(870 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 341 8e-94
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 341 8e-94
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 341 8e-94
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 330 2e-90
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 330 2e-90
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 223 2e-58
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 205 7e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 341 bits (838), Expect = 8e-94
Identities = 155/242 (64%), Positives = 177/242 (73%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKNWY
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 136
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
W D+LG+KSI+ DF+ M+RYC V+RVIAH+Q++L+KQR K AH+MEIQL
Sbjct: 137 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 196
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N G+I DKVKWA +HL EMIDC+GVT V S WH K H
Sbjct: 197 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 256
Query: 768 XG 773
G
Sbjct: 257 KG 258
Score = 33.1 bits (72), Expect = 0.51
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
KP V +VF + + + + K K LPR G RKVACIG W
Sbjct: 214 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 268
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 341 bits (838), Expect = 8e-94
Identities = 155/242 (64%), Positives = 177/242 (73%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
W D+LG+KSI+ DF+ M+RYC V+RVIAH+Q++L+KQR K AH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N G+I DKVKWA +HL EMIDC+GVT V S WH K H
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 245
Query: 768 XG 773
G
Sbjct: 246 KG 247
Score = 33.1 bits (72), Expect = 0.51
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
KP V +VF + + + + K K LPR G RKVACIG W
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 257
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 341 bits (838), Expect = 8e-94
Identities = 155/242 (64%), Positives = 177/242 (73%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
W D+LG+KSI+ DF+ M+RYC V+RVIAH+Q++L+KQR K AH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N G+I DKVKWA +HL EMIDC+GVT V S WH K H
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 245
Query: 768 XG 773
G
Sbjct: 246 KG 247
Score = 33.1 bits (72), Expect = 0.51
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
KP V +VF + + + + K K LPR G RKVACIG W
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 257
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 330 bits (810), Expect = 2e-90
Identities = 150/234 (64%), Positives = 172/234 (73%)
Frame = +3
Query: 72 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 251
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 252 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXXXXXXXXXX 431
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 432 XXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQLNXGTIXDK 611
W D+LG+KSI+ DF+ M+RYC V+RVIAH+Q++L+KQR K AH+MEIQLN G+I DK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 612 VKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XHXG 773
VKWA +HL EMIDC+GVT V S WH K H G
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
Score = 33.1 bits (72), Expect = 0.51
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
KP V +VF + + + + K K LPR G RKVACIG W
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 244
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 330 bits (810), Expect = 2e-90
Identities = 150/234 (64%), Positives = 172/234 (73%)
Frame = +3
Query: 72 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 251
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 252 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXXXXXXXXXX 431
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 432 XXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQLNXGTIXDK 611
W D+LG+KSI+ DF+ M+RYC V+RVIAH+Q++L+KQR K AH+MEIQLN G+I DK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 612 VKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XHXG 773
VKWA +HL EMIDC+GVT V S WH K H G
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
Score = 33.1 bits (72), Expect = 0.51
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
KP V +VF + + + + K K LPR G RKVACIG W
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 244
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 223 bits (546), Expect = 2e-58
Identities = 97/118 (82%), Positives = 105/118 (88%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWY 401
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 205 bits (500), Expect = 7e-53
Identities = 90/108 (83%), Positives = 98/108 (90%)
Frame = +3
Query: 72 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 251
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 252 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKN 395
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,760,987
Number of Sequences: 53049
Number of extensions: 701071
Number of successful extensions: 1268
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -