Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_N01
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 302 2e-82
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 302 2e-82
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 302 2e-82
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 302 2e-82
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 240 1e-63
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 240 1e-63
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 110 1e-24
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 110 1e-24
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 28 7.5
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 28 10.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 302 bits (741), Expect = 2e-82
Identities = 138/242 (57%), Positives = 166/242 (68%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
WQDE G+K I+ DF + +YCS +RVIAHTQMK+L++R K AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N GTI KV WA +HL EMID IGVT V S WH K H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 768 XG 773
G
Sbjct: 246 KG 247
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
K VD+VFA + + + R K LPR G RKVACIG W
Sbjct: 203 KQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 257
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 302 bits (741), Expect = 2e-82
Identities = 138/242 (57%), Positives = 166/242 (68%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
WQDE G+K I+ DF + +YCS +RVIAHTQMK+L++R K AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N GTI KV WA +HL EMID IGVT V S WH K H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 768 XG 773
G
Sbjct: 246 KG 247
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
K VD+VFA + + + R K LPR G RKVACIG W
Sbjct: 203 KQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 257
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 302 bits (741), Expect = 2e-82
Identities = 138/242 (57%), Positives = 166/242 (68%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
WQDE G+K I+ DF + +YCS +RVIAHTQMK+L++R K AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N GTI KV WA +HL EMID IGVT V S WH K H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 768 XG 773
G
Sbjct: 246 KG 247
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
K VD+VFA + + + R K LPR G RKVACIG W
Sbjct: 203 KQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 257
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 302 bits (741), Expect = 2e-82
Identities = 138/242 (57%), Positives = 166/242 (68%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQL 587
WQDE G+K I+ DF + +YCS +RVIAHTQMK+L++R K AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 588 NXGTIXDKVKWATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XH 767
N GTI KV WA +HL EMID IGVT V S WH K H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 768 XG 773
G
Sbjct: 246 KG 247
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
K VD+VFA + + + R K LPR G RKVACIG W
Sbjct: 203 KQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 257
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 240 bits (587), Expect = 1e-63
Identities = 104/163 (63%), Positives = 125/163 (76%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQM 536
WQDE G+K I+ DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 751 LPRXXTXGFRKVACIGXW 804
LPR G RKVACIG W
Sbjct: 192 LPRKTHKGLRKVACIGAW 209
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 675 EMIDCIGVTXXXXXXXVXSXWHPKXXTP*XHXG 773
+MID IGVT V S WH K H G
Sbjct: 167 QMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 240 bits (587), Expect = 1e-63
Identities = 104/163 (63%), Positives = 125/163 (76%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYXX 407
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIQKDFKXMIRYCSVVRVIAHTQM 536
WQDE G+K I+ DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 751 LPRXXTXGFRKVACIGXW 804
LPR G RKVACIG W
Sbjct: 192 LPRKTHKGLRKVACIGAW 209
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 675 EMIDCIGVTXXXXXXXVXSXWHPKXXTP*XHXG 773
+MID IGVT V S WH K H G
Sbjct: 167 QMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 110 bits (265), Expect = 1e-24
Identities = 54/111 (48%), Positives = 66/111 (59%)
Frame = +3
Query: 441 WQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQLNXGTIXDKVKW 620
WQDE G+K I+ DF + +YCS +RVIAHTQMK+L++R K AH++EIQ+N GTI KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 621 ATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XHXG 773
A +HL EMID IGVT V S WH K H G
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 134
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
K VD+VFA + + + R K LPR G RKVACIG W
Sbjct: 105 KQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 159
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 110 bits (265), Expect = 1e-24
Identities = 54/111 (48%), Positives = 66/111 (59%)
Frame = +3
Query: 441 WQDELGRKSIQKDFKXMIRYCSVVRVIAHTQMKLLKQRXKXAHIMEIQLNXGTIXDKVKW 620
WQDE G+K I+ DF + +YCS +RVIAHTQMK+L++R K AH++EIQ+N GTI KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 621 ATKHLGXTYXCRFCVCPXEMIDCIGVTXXXXXXXVXSXWHPKXXTP*XHXG 773
A +HL EMID IGVT V S WH K H G
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 134
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 640 KPXPVDSVFAXMK*LTALVSPRAKDTKVXLLXGTQXXLPRXXTXGFRKVACIGXW 804
K VD+VFA + + + R K LPR G RKVACIG W
Sbjct: 105 KQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 159
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 254 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGXYV*RLSTSLLQKLVQMQEEGF 421
GC + G C W + DPS T + DC Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 273 TPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWY 401
T P + GY++ G+R VW S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,165,945
Number of Sequences: 27780
Number of extensions: 354713
Number of successful extensions: 738
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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