Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_M23
         (871 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069812-1|AAL39957.1|  937|Drosophila melanogaster SD05477p pro...    30   3.6  
AE014298-1945|AAN09334.1|  937|Drosophila melanogaster CG32627-P...    30   3.6  
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P...    30   3.6  
AE014298-1364|AAF46519.2|  691|Drosophila melanogaster CG1343-PA...    30   4.8  
AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P...    30   4.8  
AE013599-1807|AAF58309.1|  346|Drosophila melanogaster CG6704-PA...    30   4.8  

>AY069812-1|AAL39957.1|  937|Drosophila melanogaster SD05477p
           protein.
          Length = 937

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 25/84 (29%), Positives = 39/84 (46%)
 Frame = -2

Query: 618 FAVPMRTEHVDPASFCPFAPREVSVLAELALGHVRYSLTDVPPQSNSPPGSVLEPDHAGV 439
           FA+P   ++ D +   P  P E  V+ E  + H+ Y +  VP   N+P G+ L+P   G 
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237

Query: 438 LNGDERFRHVTTXHAWNETPCARR 367
            NG   F +        E P A++
Sbjct: 238 ENGIVVFSYSPISAVNYEKPKAKK 261


>AE014298-1945|AAN09334.1|  937|Drosophila melanogaster CG32627-PB,
           isoform B protein.
          Length = 937

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 25/84 (29%), Positives = 39/84 (46%)
 Frame = -2

Query: 618 FAVPMRTEHVDPASFCPFAPREVSVLAELALGHVRYSLTDVPPQSNSPPGSVLEPDHAGV 439
           FA+P   ++ D +   P  P E  V+ E  + H+ Y +  VP   N+P G+ L+P   G 
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237

Query: 438 LNGDERFRHVTTXHAWNETPCARR 367
            NG   F +        E P A++
Sbjct: 238 ENGIVVFSYSPISAVNYEKPKAKK 261


>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
           isoform A protein.
          Length = 1201

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 25/84 (29%), Positives = 39/84 (46%)
 Frame = -2

Query: 618 FAVPMRTEHVDPASFCPFAPREVSVLAELALGHVRYSLTDVPPQSNSPPGSVLEPDHAGV 439
           FA+P   ++ D +   P  P E  V+ E  + H+ Y +  VP   N+P G+ L+P   G 
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237

Query: 438 LNGDERFRHVTTXHAWNETPCARR 367
            NG   F +        E P A++
Sbjct: 238 ENGIVVFSYSPISAVNYEKPKAKK 261


>AE014298-1364|AAF46519.2|  691|Drosophila melanogaster CG1343-PA,
           isoform A protein.
          Length = 691

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +2

Query: 413 WRKRSSPFKTPA*SGSRTLPGGEFDWGGTSVKE*RTCP--KASSARTETSRGAKGQKLAG 586
           W+K  SP  +PA +GS    GG    GG+S  +   C    ASS+ +  S G +  +   
Sbjct: 54  WKK--SP-NSPA-AGSSGSSGGGGGGGGSSAGQHSPCAISAASSSSSSGSSGGQSSRSLS 109

Query: 587 STCSVRIGTAKARPI 631
           S+ S  +    +RP+
Sbjct: 110 SSASTMVNITASRPL 124


>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
           protein.
          Length = 4547

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 55  GTDKGNPDCLIKTKHCDGPRGC 120
           G   G P C++K++ CDG R C
Sbjct: 159 GGASGTPKCILKSQLCDGKRDC 180


>AE013599-1807|AAF58309.1|  346|Drosophila melanogaster CG6704-PA
           protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 201 NYDSLKVAKCLAHLISDAHEWINEIPTFARSSLKNHYFHCFITYSVGRKRCAV 359
           N DS +  + +  +    +E ++EIP   R  +K H+    +  SV  K+C V
Sbjct: 124 NRDSAEALEFIEKIARPGYEALSEIPRSQRRFIKTHFPFSLMPPSVLEKKCKV 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,409,640
Number of Sequences: 53049
Number of extensions: 713601
Number of successful extensions: 1862
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)