Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_M23
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p...    31   1.4  
Z66494-1|CAA91262.2|  320|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
            trehalose-6-phosphate synthase protein.
          Length = 1230

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -3

Query: 677  LCTFCTLVKLFIVKDR*AVLSQSLCVLNMWIQPAFALLLHARFLSSLSWP*DTCVIL 507
            L  FC ++      DR   L    C     IQPA++ ++ A+F    +    TCVIL
Sbjct: 925  LLYFCLIISTIFFTDRDGTLKSYSCSYPSSIQPAYSGVIQAQFARRCA---QTCVIL 978


>Z66494-1|CAA91262.2|  320|Caenorhabditis elegans Hypothetical
           protein C34C6.1 protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 683 SILCTFCTLVKLFIVKDR*AVLSQSLCVLNMWIQPAF 573
           + +CT  TL KL  + DR     +SLC  N++I   F
Sbjct: 210 TFICTSVTLYKLISLSDRIKSAEKSLCFSNIYISLTF 246


>Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical
           protein F15A4.4 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -3

Query: 683 SILCTFCTLVKLFIVKDR*AVLSQSLCVLNMWIQPAFALL 564
           +I+C+  +L KL I+ DR     +SLC ++++   AF ++
Sbjct: 205 TIICSSVSLYKLIILPDRIKSAEKSLCFVSLFYSIAFLVV 244


>Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical
           protein F15A4.7 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 683 SILCTFCTLVKLFIVKDR*AVLSQSLCVLNMWIQPAFALL 564
           +I+CT  T  KL  + DR   + +SLC  ++ I   F L+
Sbjct: 210 TIVCTSVTFYKLACLSDRVRSIERSLCFTSISISCTFLLV 249


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/63 (28%), Positives = 25/63 (39%)
 Frame = -3

Query: 434 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRESGNLVNPFM 255
           T+ +   TSP  T+GT   APA++      P N  S+ T         S  +   V P  
Sbjct: 623 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVT 682

Query: 254 RVT 246
             T
Sbjct: 683 TTT 685


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/63 (28%), Positives = 25/63 (39%)
 Frame = -3

Query: 434 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRESGNLVNPFM 255
           T+ +   TSP  T+GT   APA++      P N  S+ T         S  +   V P  
Sbjct: 679 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVT 738

Query: 254 RVT 246
             T
Sbjct: 739 TTT 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,306,854
Number of Sequences: 27780
Number of extensions: 351567
Number of successful extensions: 912
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)