Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M21
(861 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 8e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 55 7e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 1e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 4e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 38 1e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.006
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.008
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.024
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.042
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.51
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 0.68
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 61.7 bits (143), Expect = 8e-12
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTF 533
PD+VL N A G+Y +R + + NG V W+ + ++ +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 KFGSXMHNTDXXDFA 578
KFGS N D A
Sbjct: 168 KFGSWTFNGDQVSLA 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V++NGS ++ + + +P D Q C KFGS ++ + D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V++NGS ++ + + +P D Q C KFGS ++ + D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V++NGS ++ + + +P D Q C KFGS ++ + D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFG 542
PD+VL N A A +A + + G V W + + + +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 543 SXMHN 557
S ++
Sbjct: 173 SWTYD 177
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V+++GS ++ + M +P D Q C KFGS ++ + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V+++GS ++ + M +P D Q C KFGS ++ + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.4 bits (135), Expect = 8e-11
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHN 557
V W + + + +P D QTC KFGS ++
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYD 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.6 bits (133), Expect = 1e-10
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 437
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 438 NGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHN 557
G VSW + + + +P D Q+C KFGS +N
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V+++GS ++ + + +P D Q C KFGS ++ + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V+++GS ++ + + +P D Q C KFGS ++ + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXD 572
G Y V+++GS ++ + + +P D Q C KFGS ++ + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTF 533
PD+VL N A G+Y + +A V +G V W + S+ + +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 534 KFGSXMHN 557
K GS ++
Sbjct: 170 KLGSWTYD 177
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.8 bits (131), Expect = 2e-10
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 362
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 363 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKF 539
PD+VL N A G + +A + G V W + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 540 GSXMHN 557
GS ++
Sbjct: 164 GSWTYD 169
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.2 bits (127), Expect = 7e-10
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 446
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 447 VSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHN 557
++ + + +P D Q C KFGS ++
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYD 172
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.4 bits (125), Expect = 1e-09
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 336 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRXDIXTPISMXXDX 503
V SE +W PD+VL N A G+Y + +A + + G V W + + +
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 504 WPNDMQTCTFKFGSXMHN 557
+P D QTC KFGS ++
Sbjct: 152 FPFDEQTCFMKFGSWTYD 169
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGS 545
+L N A + V S+ G V W+ + + + +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 546 XMHN 557
++
Sbjct: 152 WTYD 155
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +3
Query: 192 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLW 362
+I N+T+ L + + S + + + + + W D L W ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 363 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTF 533
PD+ + N+ T G V ++GSVS + + WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 534 KFGSXMHN 557
FGS +H+
Sbjct: 186 NFGSWVHS 193
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 201 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVV 377
++ L ++H N+ E TV L++ W L W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 378 L--LNAAATTAGDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXM 551
+ + + ++ V N+G++ + WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWS 181
Query: 552 HNTD 563
H ++
Sbjct: 182 HGSN 185
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 404
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 405 GDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGS 545
R+ +G V + R I M + +P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 6/138 (4%)
Frame = +3
Query: 198 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 368
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 369 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKF 539
D+ N + + R+ NGSV + R + M +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 540 GSXMHNTDXXDFAXXTXD 593
S TD F D
Sbjct: 179 ASYGWTTDDLVFLWKEGD 196
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.5 bits (88), Expect = 4e-05
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 7/130 (5%)
Frame = +3
Query: 177 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLV 344
LP H K VV + +R + E + + + +W D RL + S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 345 SSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRXDIXTPISMXXDXWPND 515
ER+WRPD N + + R+S +G + + R I M +P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 516 MQTCTFKFGS 545
Q+C GS
Sbjct: 173 RQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Frame = +3
Query: 285 WIDKRLXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 449
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 450 SWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXDFAXXTXD 593
+ R + M +P D Q C+ + S TD F D
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGD 196
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.1 bits (82), Expect = 2e-04
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 413
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGS 545
R R+S +GSV++ R M +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.7 bits (71), Expect = 0.004
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRXDIXTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 XXDXWPNDMQTCTFKFGS 545
+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.004
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRXDIXTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 XXDXWPNDMQTCTFKFGS 545
+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.7 bits (71), Expect = 0.004
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRXDIXTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 XXDXWPNDMQTCTFKFGS 545
+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.006
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Frame = +3
Query: 243 SESTVRILAD--LQMNWIDKRLXW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 410
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 411 YALRAR---VSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGSXMHNTDXXDFAX 581
++ + ++ ++ ++ + + +M + +P+D Q C+ S H T F
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIW 164
Query: 582 XTXD 593
D
Sbjct: 165 NMTD 168
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = +3
Query: 285 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 438 NGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGS 545
+GS++ R I M +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = +3
Query: 285 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 438 NGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGS 545
+GS++ R I M +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.008
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = +3
Query: 285 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFGS 545
+GS++ R I M +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.3 bits (65), Expect = 0.024
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRXDIXTPISMXXDXWPNDMQ 521
+ +WRPD NA + T + + + ++ ++ + + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TCTFKFGSXMHNTDXXDF 575
C + S H TD F
Sbjct: 176 ECKLQMESLSHTTDEMIF 193
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.042
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Frame = +3
Query: 195 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 368
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 369 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTCTFKFG 542
D ++ R+ NG+V+++ R + + +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 543 S 545
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.8 bits (54), Expect = 0.51
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRXDIXTPISMXXDXWPND 515
+ LW+PD LNA + AL + S+ N +V + R M +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 516 MQTC 527
+Q C
Sbjct: 127 IQIC 130
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.4 bits (53), Expect = 0.68
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +3
Query: 357 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRXDIXTPISMXXDXWPNDMQTC 527
+W P V + N ++A T + + + +G V R + + +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 528 TFKFGSXMHN 557
F S HN
Sbjct: 157 PLIFESWTHN 166
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,114
Number of Sequences: 438
Number of extensions: 3904
Number of successful extensions: 81
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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