Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_M19
         (815 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.3  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.7  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    30   2.3  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   3.0  
U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z73424-5|CAA97782.3|  506|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +1

Query: 202 PRLGSSLGRSPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
           P +   +     +LI P   L F++TG E KS  V + S+    +I  GYR+
Sbjct: 22  PNMEMIVNNKGPKLIFP--ELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical
           protein F45E4.3b protein.
          Length = 836

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPXLNIHFPS 628
           ++PPSPA+SA S R    R+H PT+   +   PS
Sbjct: 269 MQPPSPAVSAFSPR----RYHHPTSVASHQSHPS 298


>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
           protein F45E4.3a protein.
          Length = 1231

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPXLNIHFPS 628
           ++PPSPA+SA S R    R+H PT+   +   PS
Sbjct: 269 MQPPSPAVSAFSPR----RYHHPTSVASHQSHPS 298


>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical
           protein F54D1.6 protein.
          Length = 1423

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 547 DLGYINPIIKSPIPYTNHPXT*HPFSIKSPD 639
           D+G +    K+P+PYT  P   +P +  +P+
Sbjct: 458 DIGNVYDWFKNPLPYTTMPLVWYPRNFTNPE 488


>Z73424-5|CAA97782.3|  506|Caenorhabditis elegans Hypothetical
           protein C44B9.5 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
 Frame = +1

Query: 265 YFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCW 438
           +F+   ++T +    +++  N SSI+     AY  +  L+  +  S P  K     +   
Sbjct: 222 FFEKNPSKTSNRDSKIENRSNSSSIMYNDPSAYSNDSILDDTIISSTPPDKSSFLAETMP 281

Query: 439 TTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPXT*H 615
                        A P+SS  +I G  ++       DLG +  + K    Y + P T H
Sbjct: 282 LATPSPKNLTPKRALPTSSARSIFGHVVLPNPMKRKDLGVLAAVEKPEFDYPSSPITLH 340


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,675,688
Number of Sequences: 27780
Number of extensions: 325033
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)