Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M18
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 316 2e-86
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 316 2e-86
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 316 2e-86
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 316 2e-86
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 260 9e-70
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 260 9e-70
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 114 9e-26
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 114 9e-26
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.2
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 316 bits (775), Expect = 2e-86
Identities = 138/202 (68%), Positives = 165/202 (81%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 408
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQMXLLKQRQKKAHIMEIQL 588
KKKAFTK + KWQDE G+K I DF + +YC +RVIAHTQM +L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWATXHLEKPIPV 654
NGGTIE KV WA HLEK + V
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQV 207
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2
Query: 656 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVX 835
D+VFAQ EMID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 836 RAGQKG 853
RAGQKG
Sbjct: 268 RAGQKG 273
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 316 bits (775), Expect = 2e-86
Identities = 138/202 (68%), Positives = 165/202 (81%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 408
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQMXLLKQRQKKAHIMEIQL 588
KKKAFTK + KWQDE G+K I DF + +YC +RVIAHTQM +L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWATXHLEKPIPV 654
NGGTIE KV WA HLEK + V
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQV 207
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2
Query: 656 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVX 835
D+VFAQ EMID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 836 RAGQKG 853
RAGQKG
Sbjct: 268 RAGQKG 273
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 316 bits (775), Expect = 2e-86
Identities = 138/202 (68%), Positives = 165/202 (81%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 408
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQMXLLKQRQKKAHIMEIQL 588
KKKAFTK + KWQDE G+K I DF + +YC +RVIAHTQM +L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWATXHLEKPIPV 654
NGGTIE KV WA HLEK + V
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQV 207
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2
Query: 656 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVX 835
D+VFAQ EMID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 836 RAGQKG 853
RAGQKG
Sbjct: 268 RAGQKG 273
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 316 bits (775), Expect = 2e-86
Identities = 138/202 (68%), Positives = 165/202 (81%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 408
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQMXLLKQRQKKAHIMEIQL 588
KKKAFTK + KWQDE G+K I DF + +YC +RVIAHTQM +L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWATXHLEKPIPV 654
NGGTIE KV WA HLEK + V
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQV 207
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2
Query: 656 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVX 835
D+VFAQ EMID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 267
Query: 836 RAGQKG 853
RAGQKG
Sbjct: 268 RAGQKG 273
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 260 bits (637), Expect = 9e-70
Identities = 113/163 (69%), Positives = 133/163 (81%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 408
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQM 537
KKKAFTK + KWQDE G+K I DF + +YC +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 88.2 bits (209), Expect = 7e-18
Identities = 41/64 (64%), Positives = 43/64 (67%)
Frame = +2
Query: 662 VFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVXRA 841
V A +MID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 842 GQKG 853
GQKG
Sbjct: 222 GQKG 225
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 260 bits (637), Expect = 9e-70
Identities = 113/163 (69%), Positives = 133/163 (81%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 408
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQM 537
KKKAFTK + KWQDE G+K I DF + +YC +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 88.2 bits (209), Expect = 7e-18
Identities = 41/64 (64%), Positives = 43/64 (67%)
Frame = +2
Query: 662 VFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVXRA 841
V A +MID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 842 GQKG 853
GQKG
Sbjct: 222 GQKG 225
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 114 bits (274), Expect = 9e-26
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +1
Query: 400 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQMXLLKQRQKKAHIME 579
Y+ + KAFTK + KWQDE G+K I DF + +YC +RVIAHTQM +L++RQKKAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 580 IQLNGGTIEDKVKWATXHLEKPIPV 654
IQ+NGGTIE KV WA HLEK + V
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQV 109
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2
Query: 656 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVX 835
D+VFAQ EMID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 169
Query: 836 RAGQKG 853
RAGQKG
Sbjct: 170 RAGQKG 175
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 135
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 114 bits (274), Expect = 9e-26
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +1
Query: 400 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCXVVRVIAHTQMXLLKQRQKKAHIME 579
Y+ + KAFTK + KWQDE G+K I DF + +YC +RVIAHTQM +L++RQKKAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 580 IQLNGGTIEDKVKWATXHLEKPIPV 654
IQ+NGGTIE KV WA HLEK + V
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQV 109
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2
Query: 656 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLPRKTHXSLXKVACIGAWHPSRVSFTVX 835
D+VFAQ EMID I SRWHTK LPRKTH L KVACIGAWHPSRV+FTV
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVA 169
Query: 836 RAGQKG 853
RAGQKG
Sbjct: 170 RAGQKG 175
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 135
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 274 TPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWY 402
T P + GY+ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 700 DTNAVNHFXLGKHRIEQG*VSPD 632
D+N +NHF + KH++EQ + P+
Sbjct: 467 DSNVINHFAVTKHQMEQLDLRPE 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,301,872
Number of Sequences: 27780
Number of extensions: 396363
Number of successful extensions: 944
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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