Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_M16
         (835 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0189 + 1578935-1578950,1579227-1579390,1579493-1579605,157...   163   1e-40
11_06_0125 - 20356683-20357071,20359531-20362285                       29   3.5  
11_03_0149 + 10787332-10787454,10787776-10788529,10790406-107904...    28   8.0  

>08_01_0189 +
           1578935-1578950,1579227-1579390,1579493-1579605,
           1579850-1580399,1580514-1580813,1581093-1581133,
           1581359-1581606,1581983-1582086,1582177-1582323
          Length = 560

 Score =  163 bits (397), Expect = 1e-40
 Identities = 101/262 (38%), Positives = 129/262 (49%), Gaps = 23/262 (8%)
 Frame = +3

Query: 15  ATKFRKGACENCGAMTHKKKDCLERPXKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWN 194
           A K+RKGACENCGAMTH KK C+ERP  +GAK+TN  IA DE  +    L YDGKRDRWN
Sbjct: 88  ANKYRKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVE-SFELDYDGKRDRWN 146

Query: 195 GYDPEQHKAIIEEYXKVXEA-KRXLXXKKL-------------XIDPTAXXXXXXXXXXX 332
           GYDP  +  +I +Y    EA K+ L  ++L              +               
Sbjct: 147 GYDPSTYTRVIADYEAREEARKKYLKEQQLKKLEEKDGEEGDENVASEEEDEEDGLKIDE 206

Query: 333 XXXXXXXXMPGTKVDSKQRIT-------VRNLRIREGTAKYLRNLDPNSAYYDPXTRSMX 491
                   M   KV+ + R T       VRNLRIRE TAKYL NLD NSAYYDP TRSM 
Sbjct: 207 AKVDESAQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMR 266

Query: 492 DNPTPNVPESE--YGGENSVRVSGDTXXXXXXXXXXXXXXXXXXXXXXXXEPTKLXMLQA 665
           ++P P+   ++  Y G+N  R+SG                           P++  +L  
Sbjct: 267 EDPLPDADPNDKFYVGDNQNRLSGQALEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFK 326

Query: 666 HYKRXQXRYKSXVKQSILEXYG 731
            +K  + + KS  K  I+E YG
Sbjct: 327 SFKIKKEKLKSENKDKIMEKYG 348


>11_06_0125 - 20356683-20357071,20359531-20362285
          Length = 1047

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 414  REGTAKYLRNLDPNSAYYDPXTRSMXDNPTPNVPESEYGGENSVRVSGD 560
            R G     R LD  ++ + P T S+    T      EYG  N+V   GD
Sbjct: 883  RVGDFGLARILDEQNSVFQPSTNSILFRGTIGYAAPEYGAGNTVSTQGD 931


>11_03_0149 +
           10787332-10787454,10787776-10788529,10790406-10790473,
           10791254-10791421
          Length = 370

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 39  CENCGAMTHKKKDCLERPXKIGAKFTNAGIAADE 140
           C NCG   H    C ++  + G + TNA    D+
Sbjct: 136 CFNCGGKGHYSNKCPQKQKQHGVRSTNAAAMKDK 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,047,531
Number of Sequences: 37544
Number of extensions: 257539
Number of successful extensions: 737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)