Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M16
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 207 7e-54
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 29 4.1
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 29 4.1
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 5.4
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 28 9.5
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 28 9.5
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 9.5
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 207 bits (506), Expect = 7e-54
Identities = 107/254 (42%), Positives = 140/254 (55%), Gaps = 8/254 (3%)
Frame = +3
Query: 9 KVATKFRKGACENCGAMTHKKKDCLERPXKIGAKFTNAGIAADEFAQPDLNLSYDGKRDR 188
K ATKFRKGACENCGAM H+K+DC +RP K AK TN IA D++ QP+L L +D KRDR
Sbjct: 105 KSATKFRKGACENCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDR 164
Query: 189 WNGYDPEQHKAIIEEYXKVXEAKRXL---XXKKLXIDPTAXXXXXXXXXXXXXXXXXXXM 359
WNGYDP HK +IE+Y + EA++ + K+ ++P
Sbjct: 165 WNGYDPSTHKQVIEDYEHLEEARKVVREHEMKEGEVEPATTEDGAPKDEDMYAEDADMAG 224
Query: 360 PGTKVDSKQRITVRNLRIREGTAKYLRNLDPNSAYYDPXTRSMXDNPTPNVPESE----- 524
+DS+ RITVRNLRIRE TAKYL NL NS YYDP +RSM +NP V E
Sbjct: 225 VSVDMDSRTRITVRNLRIREDTAKYLYNLAENSPYYDPKSRSMRENPFAGVAGKELEAAR 284
Query: 525 YGGENSVRVSGDTXXXXXXXXXXXXXXXXXXXXXXXXEPTKLXMLQAHYKRXQXRYKSXV 704
+ G+N VR SG+ EPTKL L+ Y++ + K+
Sbjct: 285 FSGDNFVRYSGEVTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNET 344
Query: 705 KQSILEXYGGEEHL 746
++ +L+ YGG EH+
Sbjct: 345 QKELLDKYGGGEHM 358
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 90 PXKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAII 227
P + AK +D++ +P + S W GY P++ A++
Sbjct: 691 PTPVPAKMCGTVSDSDDWREPSGSPSESNSSTEWGGYTPQEQHAVV 736
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 90 PXKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAII 227
P + AK +D++ +P + S W GY P++ A++
Sbjct: 691 PTPVPAKMCGTVSDSDDWREPSGSPSESNSSTEWGGYTPQEQHAVV 736
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 33 GACENCGAMTHKKKDCLE 86
G C CGA TH ++DC E
Sbjct: 307 GCCNVCGANTHLRRDCPE 324
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 417 PGYAGYEL*CAASNPPLCRACPL 349
PG + C A++PP CR CP+
Sbjct: 149 PGKTTIQAPCEAASPPPCRVCPV 171
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 456 NWGPDSAGTWLCPPGYAG 403
N G S G +CPPGYAG
Sbjct: 875 NGGTVSGGQCVCPPGYAG 892
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 159 NLSYDGKR--DRWNGYDPEQHKAIIEEYXKVXEAKR 260
N DGKR + YDP H+ +E+Y K E +R
Sbjct: 7 NADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQR 42
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 159 NLSYDGKR--DRWNGYDPEQHKAIIEEYXKVXEAKR 260
N DGKR + YDP H+ +E+Y K E +R
Sbjct: 7 NADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQR 42
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 159 NLSYDGKR--DRWNGYDPEQHKAIIEEYXKVXEAKR 260
N DGKR + YDP H+ +E+Y K E +R
Sbjct: 7 NADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQR 42
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 159 NLSYDGKR--DRWNGYDPEQHKAIIEEYXKVXEAKR 260
N DGKR + YDP H+ +E+Y K E +R
Sbjct: 7 NADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQR 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,990,415
Number of Sequences: 27780
Number of extensions: 209283
Number of successful extensions: 659
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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