Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M15
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 119 3e-27
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 56 4e-08
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 53 3e-07
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 52 7e-07
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 52 7e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 47 2e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 47 2e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 46 3e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 46 3e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 46 4e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 45 8e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 45 8e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 44 1e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 44 1e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 44 1e-04
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 44 1e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 44 1e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 44 1e-04
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 43 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 43 3e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 4e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 4e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 41 0.001
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 41 0.001
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 40 0.003
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 39 0.004
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.020
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 37 0.020
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 36 0.035
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.035
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.035
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.035
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.062
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.062
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 34 0.11
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.19
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 33 0.25
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 33 0.25
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 33 0.25
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 33 0.25
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 33 0.25
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 33 0.25
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 33 0.25
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 30 2.3
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 29 3.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.1
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical... 29 4.1
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 29 5.4
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 29 5.4
Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 119 bits (286), Expect = 3e-27
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEX 623
ENP PS+CLGVF LS YTTE+ + +F ++G ++K +V D +G SRGF F+YF +E
Sbjct: 70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIED 129
Query: 624 AXIAKNECXGMEIDGRRIRVDYSITQRAHTPTPGXYMG 737
A A+++ ++DG +IRVD+S+T+R H+PTPG YMG
Sbjct: 130 ATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQYMG 167
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRI 677
TE++I + F+ G V+ V++V D +TGR RGF FV F + A A + G+ +GR +
Sbjct: 18 TEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNL 77
Query: 678 RVDYS 692
RV+Y+
Sbjct: 78 RVNYA 82
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +3
Query: 495 TTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRR 674
TTE+++ + FS G ++ V++V D +TGR RGF F+ F + A A + G E +GR
Sbjct: 16 TTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRP 75
Query: 675 IRVD 686
+RV+
Sbjct: 76 LRVN 79
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +3
Query: 447 NPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXA 626
N R + V +S +E I IFSK G V +++V D +TG+ +G+ F+ F D++ A
Sbjct: 13 NDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTA 72
Query: 627 XIAKNECXGMEIDGRRIRVD 686
+A G E+ GR +RVD
Sbjct: 73 EVAIRNLNGYELSGRILRVD 92
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +3
Query: 495 TTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRR 674
TTE + + FS+ G V V++V D +TGR RGF FV F + A A ++ G++ +GR
Sbjct: 15 TTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRA 74
Query: 675 IRVD 686
+RV+
Sbjct: 75 LRVN 78
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +3
Query: 480 GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGME 659
GLS +E + +FS+YG V + ++ D TG+S+GF F+ ++D +A + G+
Sbjct: 44 GLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGIS 103
Query: 660 IDGRRIRVDY 689
+ R IRVD+
Sbjct: 104 LHKRMIRVDH 113
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 456 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIA 635
P R L V ++ T+E ++ F YG + K+ +V D + G+ RG+ F+ + D A
Sbjct: 102 PYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAEMHTA 160
Query: 636 KNECXGMEIDGRRIRVDY 689
+ G+++DG+R+ VDY
Sbjct: 161 YKKADGIKVDGKRLVVDY 178
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIR 680
E+++ IF KYG + V D K+GR F FV FED A A G E DGRRIR
Sbjct: 22 EKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIR 77
Query: 681 VDYS 692
V+++
Sbjct: 78 VEFT 81
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIR 680
E+++ IF KYG + V D K+GR F FV FED A A G E DGRRIR
Sbjct: 22 EKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIR 77
Query: 681 VDYS 692
V+++
Sbjct: 78 VEFT 81
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 495 TTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRR 674
T E + +F KYG V +VQVVID KTG +GF V F E A A + G GR
Sbjct: 290 TKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRM 349
Query: 675 IRV 683
+ +
Sbjct: 350 MHI 352
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 614
TEQQ+ F KYG + + K G+ RGF FV F D
Sbjct: 15 TEQQLRKFFEKYGQISDASLKY-TKEGKFRGFAFVGFLD 52
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +3
Query: 456 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIA 635
P L V L+ TT++ + IFS++G ++ ++V D ++G S + F+ F++ + A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 636 KNECXGMEIDGRRIRVDYS 692
+ + ID RRI VD+S
Sbjct: 299 FFKMDNVLIDDRRIHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +3
Query: 456 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIA 635
P L V L+ TT++ + IFS++G ++ ++V D ++G S + F+ F++ + A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 636 KNECXGMEIDGRRIRVDYS 692
+ + ID RRI VD+S
Sbjct: 299 FFKMDNVLIDDRRIHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +3
Query: 456 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIA 635
P L V L+ TT++ + IFS++G ++ ++V D ++G S + F+ F++ + A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 636 KNECXGMEIDGRRIRVDYS 692
+ + ID RRI VD+S
Sbjct: 230 FFKMDNVLIDDRRIHVDFS 248
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEX 623
++P R L + GLS TT++Q+ + FS++GPV V+ D T SRGF FV F +
Sbjct: 43 DSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 102
Query: 624 AXIAKNE----CXGMEIDGRR 674
A A N+ G +D +R
Sbjct: 103 AESAMNDRPHKLGGKTVDSKR 123
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEX 623
++P R L + GLS TT++Q+ + FS++GPV V+ D T SRGF FV F +
Sbjct: 63 DSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 122
Query: 624 AXIAKNE----CXGMEIDGRR 674
A A N+ G +D +R
Sbjct: 123 AESAMNDRPHKLGGKTVDSKR 143
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEX 623
++P R L + GLS TT++Q+ + FS++GPV V+ D T SRGF FV F +
Sbjct: 64 DSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 123
Query: 624 AXIAKNE----CXGMEIDGRR 674
A A N+ G +D +R
Sbjct: 124 AESAMNDRPHKLGGKTVDSKR 144
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 462 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKN 641
R L V + E + +F K GPV V+++ + + S+GF FV ++ + A A+
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARA 157
Query: 642 ECXGMEIDGRRIRVDYSITQRAH 710
E G I+GRR+ V+ + TQR H
Sbjct: 158 EFNGTTIEGRRVEVNLA-TQRVH 179
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 462 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKN 641
R L V + E + +F K GPV V+++ + + S+GF FV ++ + A A+
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARA 157
Query: 642 ECXGMEIDGRRIRVDYSITQRAH 710
E G I+GRR+ V+ + TQR H
Sbjct: 158 EFNGTTIEGRRVEVNLA-TQRVH 179
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 468 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNEC 647
L + LS TT + F +YG + V + D + +S+GF FV F + A A +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 648 XGMEIDGRRIRV 683
G +DGR +RV
Sbjct: 81 DGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 468 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNEC 647
L + LS TT + F +YG + V + D + +S+GF FV F + A A +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 648 XGMEIDGRRIRV 683
G +DGR +RV
Sbjct: 81 DGKLVDGRELRV 92
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXG 653
V +S E + F +GP+ + + D TG + F FV +E E A +A+ G
Sbjct: 106 VGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Query: 654 MEIDGRRIRVDYSITQRAHTP 716
+ GR ++V+ + Q P
Sbjct: 166 QMLGGRNLKVNSMMFQEMRLP 186
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXG 653
V +S E + F +GP+ + + D TG + F FV +E E A +A+ G
Sbjct: 106 VGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Query: 654 MEIDGRRIRVDYSITQRAHTP 716
+ GR ++V+ + Q P
Sbjct: 166 QMLGGRNLKVNSMMFQEMRLP 186
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXG 653
V +S E + F +GP+ + + D TG + F FV +E E A +A+ G
Sbjct: 106 VGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Query: 654 MEIDGRRIRVDYSITQRAHTP 716
+ GR ++V+ + Q P
Sbjct: 166 QMLGGRNLKVNSMMFQEMRLP 186
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +3
Query: 462 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKN 641
R L V G + TE+ + F +G V + + +D ++G+ RGF FV F+ E A +A +
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 642 ECXGMEIDGRRIRVDYSITQRA 707
E+ G+ IRV+++ +A
Sbjct: 71 NMNESELFGKTIRVNFARPPKA 92
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +3
Query: 429 RVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYF 608
++ L R L + ++ T + + FS G V V+++ D++TGRS+G C+V F
Sbjct: 14 KLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
Query: 609 EDMEXAXIAKNECXGMEIDGRRI 677
D E + G+ ++G+R+
Sbjct: 74 WDEESVPL------GLALNGQRL 90
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +3
Query: 429 RVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYF 608
++ L R L + ++ T + + FS G V V+++ D++TGRS+G C+V F
Sbjct: 159 KLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
Query: 609 EDMEXAXIAKNECXGMEIDGRRI 677
D E + G+ ++G+R+
Sbjct: 219 WDEESVPL------GLALNGQRL 235
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 519 IFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRVDYSIT 698
+F K GPV V+++ + + S+GF FV ++ + A A+ E G I+GRR+ V+ + T
Sbjct: 1 MFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-T 57
Query: 699 QRAH 710
QR H
Sbjct: 58 QRVH 61
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 614
E+ ++ L V G+ TE + F+KYG V K ++++D T + RGF FV F+D
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD 164
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P R + V GL+ TT+ + +S++G + + V+ D T RSRGF FV F
Sbjct: 19 PENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
Query: 630 IAKNECXGMEIDGRRI 677
A + + IDG+ +
Sbjct: 79 AAMKQRPHI-IDGKTV 93
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 614
E+ ++ L V G+ TE + F+KYG V K ++++D T + RGF FV F+D
Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD 126
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 614
E+ ++ L V G+ TE + F+KYG V K ++++D T + RGF FV F+D
Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD 126
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 614
E+ ++ L V G+ TE + F+KYG V K ++++D T + RGF FV F+D
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD 164
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P R + V GL+ TT+ + +S++G + + V+ D T RSRGF FV F
Sbjct: 19 PENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
Query: 630 IAKNECXGMEIDGRRI 677
A + + IDG+ +
Sbjct: 79 AAMKQRPHI-IDGKTV 93
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 614
E+ ++ L V G+ TE + F+KYG V K ++++D T + RGF FV F+D
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD 164
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P R + V GL+ TT+ + +S++G + + V+ D T RSRGF FV F
Sbjct: 19 PENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
Query: 630 IAKNECXGMEIDGRRI 677
A + + IDG+ +
Sbjct: 79 AAMKQRPHI-IDGKTV 93
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 480 GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGME 659
GLS TT + + F ++G V++ V+ D T R+RGF F+ F D N E
Sbjct: 51 GLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN-REHE 109
Query: 660 IDGRRI 677
+DG++I
Sbjct: 110 LDGKKI 115
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 453 TPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXA 626
T ++ + + GLS +T + + F YG V+ ++ D T R RGF FV F+ E A
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 480 GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGME 659
GLS TT + + F ++G V++ V+ D T R+RGF F+ F D N E
Sbjct: 51 GLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN-REHE 109
Query: 660 IDGRRI 677
+DG++I
Sbjct: 110 LDGKKI 115
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 453 TPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXA 626
T ++ + + GLS +T + + F YG V+ ++ D T R RGF FV F+ E A
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/72 (25%), Positives = 39/72 (54%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRI 677
TE ++ FS+YG + + + +D +TG +G+ V +E + A A ++ ++ G+ +
Sbjct: 67 TEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNV 126
Query: 678 RVDYSITQRAHT 713
+VD+ + T
Sbjct: 127 KVDWCFVKGKKT 138
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P + L V + + + +F K+G V V+++ + + S+GF FV E + A
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAE 206
Query: 630 IAKNECXGMEIDGRRIRVDYSITQRAHT 713
A+ E G I+GR+I V+ + T R H+
Sbjct: 207 RARQELHGSMIEGRKIEVNCA-TARVHS 233
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P + L V + + + +F K+G V V+++ + + S+GF FV E + A
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAE 206
Query: 630 IAKNECXGMEIDGRRIRVDYSITQRAHT 713
A+ E G I+GR+I V+ + T R H+
Sbjct: 207 RARQELHGSMIEGRKIEVNCA-TARVHS 233
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 495 TTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRR 674
T + Q+ H F +YG + V + D TG RGF + F+ + A A + + IDG R
Sbjct: 36 TGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHV-IDGDR 94
Query: 675 IRVD 686
+ V+
Sbjct: 95 VDVE 98
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIA 635
V G+S + ++ F++YG V + QV D GRSRGF FV F E +A
Sbjct: 33 VGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNE 644
V GL +EQ + F ++G VD ++ D +T R F F+ FE+ E A A ++
Sbjct: 114 VGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIA 635
V G+S + ++ F++YG V + QV D GRSRGF FV F E +A
Sbjct: 33 VGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNE 644
V GL +EQ + F ++G VD ++ D +T R F F+ FE+ E A A ++
Sbjct: 114 VGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P +R L + L T +++ IF K+G V +++V T +RG FV +ED+ A
Sbjct: 15 PEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVYEDIFDAK 71
Query: 630 IAKNECXGMEIDGRRIRVDY 689
A G + R + V Y
Sbjct: 72 TACEHLSGYNVSNRYLVVLY 91
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = +3
Query: 423 GDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFV 602
GD+ P S L + GL T + + + SKYG + + ++D T +G+ FV
Sbjct: 68 GDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 127
Query: 603 YFEDMEXAXIAKNECXGMEIDGRRIRVDYSITQRAHTPT 719
FE + A A + G+ +G + ++ + Q+ PT
Sbjct: 128 DFESPQAAAAAVD---GLNTEGVQAQM-AKLQQQEQDPT 162
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRI 677
+++ + F KY K +VV +++T +S+G+ FV F D E A E G + R I
Sbjct: 215 SDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPI 274
Query: 678 RV 683
++
Sbjct: 275 KL 276
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +3
Query: 483 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
LS + + + F+K+G V + +V+ D +T +S+G+ FV F + + A A G I
Sbjct: 142 LSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWI 201
Query: 663 DGRRIRVDYS 692
R +R +++
Sbjct: 202 GKRAVRTNWA 211
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXG 653
V +S TT+ + +FS YG + +V++ KT R + FV +E E A A E G
Sbjct: 241 VGNISQQTTDADLRDLFSTYGDIAEVRIF---KTQR---YAFVRYEKKECATKAIMEMNG 294
Query: 654 MEIDGRRIRVDYSITQ 701
E+ G ++R + TQ
Sbjct: 295 KEMAGNQVRCSWGRTQ 310
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 483 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
L+ +E+ I H F YG + V + GF FV F+D A A ++ G E+
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 663 DGRRIRVDYS 692
G R+ +DYS
Sbjct: 62 GGERVILDYS 71
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 483 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
L+ +E+ I H F YG + V + GF FV F+D A A ++ G E+
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 663 DGRRIRVDYS 692
G R+ +DYS
Sbjct: 62 GGERVILDYS 71
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 483 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
L+ +E+ I H F YG + V + GF FV F+D A A ++ G E+
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 663 DGRRIRVDYS 692
G R+ +DYS
Sbjct: 62 GGERVILDYS 71
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 444 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE-DME 620
E+ T + + + LS T E+ I SK+G +D + +G S+G FV+F +E
Sbjct: 257 ESITEGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIE 316
Query: 621 XAXIAKNECXGMEIDGRRIRVDYSITQR 704
+ + G+ ID R ++ + +I ++
Sbjct: 317 ASNCIEGVEDGVIIDNRLVKANLAIPRK 344
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFS-KYGPVDKVQVVIDAKTGRSRGFCFVYF-EDMEXAXIAKNEC 647
V L TE + FS + GPV+ V++V D TG+ +GF FV F +D + E
Sbjct: 250 VGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMET 309
Query: 648 XGMEIDGRRI 677
ME RI
Sbjct: 310 IKMEKRDLRI 319
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 453 TPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGR-SRGFCFVYFEDMEXAX 629
+P++ + + LS + + IFS YG + V + D RG+ +V ++++E A
Sbjct: 130 SPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAE 189
Query: 630 IAKNECXGMEIDGRRIRVDYSITQRA 707
+ G +IDG + V+ +I +++
Sbjct: 190 KSIKHMDGGQIDGMAVHVEMTIGRQS 215
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
FS +G + +V++D + GRS+GF FV FE E A A + I + + V
Sbjct: 363 FSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
FS +G + +V D + G S+G+ FV+FE A A + GM + +++ V
Sbjct: 165 FSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
FS +G + +V++D + GRS+GF FV FE E A A + I + + V
Sbjct: 363 FSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
FS +G + +V D + G S+G+ FV+FE A A + GM + +++ V
Sbjct: 165 FSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.035
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 504 QQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
+ I FS +G + +V ID + G S+G+ FV+FE E A A + GM + G+++ V
Sbjct: 134 KSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNE 644
F YG + +V+ D + GRS+GF FV FE E A A E
Sbjct: 337 FESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTE 376
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIR 680
++ + +F+K+G + +V+ G+S+GF FV F + E A A I+G ++
Sbjct: 226 KETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 283
Query: 681 VDYSITQR 704
+ Q+
Sbjct: 284 LHVCRAQK 291
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.035
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 504 QQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
+ I FS +G + +V ID + G S+G+ FV+FE E A A + GM + G+++ V
Sbjct: 71 KSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRVDYSITQ 701
F YG + +V+ D + GRS+GF FV FE E A A E + + + V +I Q
Sbjct: 274 FESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQ 330
Query: 702 R 704
R
Sbjct: 331 R 331
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIR 680
++ + +F+K+G + +V+ G+S+GF FV F + E A A I+G ++
Sbjct: 163 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 220
Query: 681 VDYSITQR 704
+ Q+
Sbjct: 221 LHVCRAQK 228
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.035
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 504 QQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRV 683
+ I FS +G + +V ID + G S+G+ FV+FE E A A + GM + G+++ V
Sbjct: 134 KSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRVDYSITQ 701
F YG + +V+ D + GRS+GF FV FE E A A E + + + V +I Q
Sbjct: 337 FESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQ 393
Query: 702 R 704
R
Sbjct: 394 R 394
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIR 680
++ + +F+K+G + +V+ G+S+GF FV F + E A A I+G ++
Sbjct: 226 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 283
Query: 681 VDYSITQR 704
+ Q+
Sbjct: 284 LHVCRAQK 291
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKV-QVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRI 677
E+ + FS +G + +V +++ D +G S+GF F+ F E + A G + R I
Sbjct: 113 EKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAI 172
Query: 678 RVDYS 692
V Y+
Sbjct: 173 TVSYA 177
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXG 653
V GL +E + + + GPV V + D T +GF FV F E A A
Sbjct: 17 VGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNM 76
Query: 654 MEIDGRRIRVD 686
+++ G+ I+V+
Sbjct: 77 IKLYGKPIKVN 87
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKV-QVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRI 677
E+ + FS +G + +V +++ D +G S+GF F+ F E + A G + R I
Sbjct: 123 EKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAI 182
Query: 678 RVDYS 692
V Y+
Sbjct: 183 TVSYA 187
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 474 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXG 653
V GL +E + + + GPV V + D T +GF FV F E A A
Sbjct: 27 VGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNM 86
Query: 654 MEIDGRRIRVD 686
+++ G+ I+V+
Sbjct: 87 IKLYGKPIKVN 97
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 522 FSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIRVDYSITQ 701
F YG + +V+ D + GRS+GF FV FE E A A E + + + V +I Q
Sbjct: 277 FESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQ 333
Query: 702 R 704
R
Sbjct: 334 R 334
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRIR 680
++ + +F+K+G + +V+ G+S+GF FV F + E A A I+G ++
Sbjct: 166 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 223
Query: 681 VDYSITQR 704
+ Q+
Sbjct: 224 LHVCRAQK 231
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDG 668
TE+++N +F +Y +D+V+ V D + F++F + + A E G E++G
Sbjct: 389 TEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAMEEWNGKELEG 437
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 501 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEI 662
E +F KYG V ++ D T S+G CFV F + A A+ +++
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNECXGMEIDGRRI 677
+++ + H F YG + V + GF FV F+D A A ++ G E+ G R+
Sbjct: 14 SDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAVHDLNGKELCGERV 65
Query: 678 RVDY 689
+++
Sbjct: 66 ILEF 69
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 498 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 611
T+ ++ +FSK+G V V+ V K G+ +G FV F+
Sbjct: 695 TDDELKALFSKFGTVTSVRRVTH-KDGKPKGIAFVDFD 731
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 462 RC-LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAK 638
RC L V L E ++ +FS +G + + + +GF F+ + A AK
Sbjct: 115 RCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAK 167
Query: 639 NECXGMEIDGRRIRVDYSI 695
G I GR++RV +++
Sbjct: 168 EAIDGRIIHGRQVRVRFAV 186
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 483 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 611
LS + + + H FS +G V++ ++D K GR G V FE
Sbjct: 196 LSPTVSNEMLYHAFSHFGDVERAVHIVDEK-GRPTGEGIVEFE 237
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 462 RC-LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAXIAK 638
RC L V L E ++ +FS +G + + + +GF F+ + A AK
Sbjct: 115 RCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAK 167
Query: 639 NECXGMEIDGRRIRVDYSI 695
G I GR++RV +++
Sbjct: 168 EAIDGRIIHGRQVRVRFAV 186
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 483 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 611
LS + + + H FS +G V++ ++D K GR G V FE
Sbjct: 196 LSPTVSNEMLYHAFSHFGDVERAVHIVDEK-GRPTGEGIVEFE 237
>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
protein Y22D7AR.12 protein.
Length = 1137
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 546 KVQVVIDAKTGRSRGFCFVYFEDMEXAXIAKNE 644
K V++ GRSR CF Y E + +AKN+
Sbjct: 982 KTPVIVHCYDGRSRSACFAYME-LACQMVAKND 1013
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 447 NPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXA 626
NP PS + V L TE + S +GPV + ++ V FED+E A
Sbjct: 27 NPNPSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSR------MALVEFEDIEGA 80
Query: 627 XIAKNECXGMEID--GRRIRVDYSITQ 701
N +I+ G+ +YS +Q
Sbjct: 81 KACVNFATSNQINVGGQGALFNYSTSQ 107
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 447 NPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXA 626
NP PS + V L TE + S +GPV + ++ V FED+E A
Sbjct: 27 NPNPSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSR------MALVEFEDIEGA 80
Query: 627 XIAKNECXGMEID--GRRIRVDYSITQ 701
N +I+ G+ +YS +Q
Sbjct: 81 KACVNFATSNQINVGGQGALFNYSTSQ 107
>Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical
protein F47H4.4 protein.
Length = 518
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 662 NFHSGAFILCNXSXFHVLKVNEAKPSGATCLCINYN 555
NF G F + N +L V E SG T I YN
Sbjct: 462 NFERGCFRMLNYDPMKILNVFEQNYSGGTSGSITYN 497
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 450 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEXAX 629
P +R + + L T Q + +G VD V ++ R R F F+D E A
Sbjct: 381 PQATRVIIIRNLPSDYTWQIVRDRVRNFGEVDSVDMMAPG-AARIR---FATFQDAERAR 436
Query: 630 IAKNECXGMEIDGRRIRVDYS 692
A G ++GR I VDY+
Sbjct: 437 AA---LYGSTVEGRMISVDYA 454
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,037
Number of Sequences: 27780
Number of extensions: 301288
Number of successful extensions: 846
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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