Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M14
(898 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 50 4e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 5e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 6e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 8e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 41 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.10
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.8
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 54.0 bits (124), Expect = 2e-09
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 277
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 448
+ W L W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 449 SCIKRLDISTPISMXLDXWPNDMXTCT 529
C+ + WP D+ CT
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCT 174
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.4 bits (120), Expect = 5e-09
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 VRILADLQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 427
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 428 VSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
+ G V + + + +P D TC F
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 49.6 bits (113), Expect = 4e-08
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLXWNAXEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCI 457
+D+RL + + + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KRLDISTPISMXLDXWPNDMXTCTFXFXFXGW 553
RL I M L+ +P D C F G+
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSFGY 153
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 49.2 bits (112), Expect = 5e-08
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 271
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 272 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 VSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
V + + ++ +P D TC F
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKF 167
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDIST 478
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 479 PISMXLDXWPNDMXTCTFXF 538
+ + +P D C F
Sbjct: 178 TCKIDITWFPFDDQHCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDIST 478
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 479 PISMXLDXWPNDMXTCTFXF 538
+ + +P D C F
Sbjct: 178 TCKIDITWFPFDDQHCDMKF 197
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLX 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAXEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDIST 478
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 479 PISMXLDXWPNDMXTCTFXF 538
+ ++ +P D TC F
Sbjct: 152 SCEIDVEYFPFDEQTCVLKF 171
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
G Y V++NGS + + + + +P D C F
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 283
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 284 WIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 451
W D L W ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 452 CIKRLDISTPISMXLDXWPNDMXTCTFXF 538
C+ + + WP D C F
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINF 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.4 bits (105), Expect = 4e-07
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
G Y V+++GS + + M + +P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKF 129
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 4e-07
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLX 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAXEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLD 469
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 470 ISTPISMXLDXWPNDMXTC 526
+ S+ ++ +P D+ TC
Sbjct: 149 YKSSCSIDVEFFPYDVQTC 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 4e-07
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLX 304
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 305 WNAXEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLD 469
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 470 ISTPISMXLDXWPNDMXTCTFXF 538
+ + ++ +P D +C F
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKF 176
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
G Y V+++GS + + M + +P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKF 129
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.0 bits (104), Expect = 5e-07
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 244
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 245 ESTVRILADLQMNWIDKRLXWNAXEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 418
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 419 ---RARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
+A + + G V + + ++ +P D TC F
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKF 163
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.6 bits (103), Expect = 6e-07
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RILADLQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 430
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 431 SNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
NNG+ + + + + +P D C F
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKF 166
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
G Y V+++GS + + + + +P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
G Y V+++GS + + + + +P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKF 129
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTFXF 538
G Y V+++GS + + + + +P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKF 129
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAXEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTF 532
PD+VL N A G+Y +R + + NG V + + ++ + +P D TC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 533 XF 538
F
Sbjct: 168 KF 169
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 11/149 (7%)
Frame = +2
Query: 140 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 298
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LXWNAXEWGCS-TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRL 466
L +N L + R+W PD+ N + + R+ NGSV R+
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 467 DISTPISMXLDXWPNDMXTCTFXFXFXGW 553
++ M L +P D C+ GW
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMASYGW 183
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 287 IDKRLXWNAXEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 439
D RL + G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFK-KRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 440 GSVSCIKRLDISTPISMXLDXWPNDMXTCTFXFXFXGW 553
GS++ RL I+ M L +P D C G+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGY 161
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.9 bits (94), Expect = 8e-06
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 287 IDKRLXWNAXEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 439
D RL + G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFK-KRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 440 GSVSCIKRLDISTPISMXLDXWPNDMXTCTFXFXFXGW 553
GS++ RL I+ M L +P D C G+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGY 161
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Frame = +2
Query: 140 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 298
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LXWNAXEWGCS-TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRL 466
L +N L + R+W PD+ N + + R+ NGSV R+
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 467 DISTPISMXLDXWPNDMXTCTFXFXFXGW 553
++ M L +P D C+ GW
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMASYGW 183
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRAR--VSNNGSVSCIKRLDISTPISMXLDXWPNDMXTC 526
+L N A + VS+ G V + + + ++ +P D C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.3 bits (90), Expect = 2e-05
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 292
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLXWNAXEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSCIKR 463
RL + S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDISTPISMXLDXWPNDMXTC 526
L I M L +P D +C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.1 bits (82), Expect = 2e-04
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 7/144 (4%)
Frame = +2
Query: 143 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWN 310
I +L YD P+ ++V + L + + I E I L W D+RL ++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 311 AXEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTP 481
E + +E++W PD N + D R R+S +GSV+ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 482 ISMXLDXWPNDMXTCTFXFXFXGW 553
M L +P D CT G+
Sbjct: 161 CMMDLHYYPLDSQNCTVEIESYGY 184
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.1 bits (72), Expect = 0.004
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLXW-NAXEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 CIKRLDISTPISMXLDXWPNDMXTCTF 532
+ R + L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.004
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLXW-NAXEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 CIKRLDISTPISMXLDXWPNDMXTCTF 532
+ R + L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.1 bits (72), Expect = 0.004
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLXW-NAXEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 CIKRLDISTPISMXLDXWPNDMXTCTF 532
+ R + L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 28.3 bits (60), Expect = 0.10
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAXEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMXLDXWPNDMXTCTF 532
D ++ R+ NG+V+ + R + L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 3.8
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSCIKRLDISTPISMXLDXWPND 514
+ LW+PD LNA + AL + S+ N +V R+ M +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 515 MXTC 526
+ C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,245
Number of Sequences: 438
Number of extensions: 4231
Number of successful extensions: 57
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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