Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_M10
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   1.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.6  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    22   8.0  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/19 (47%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 603 NTIA-LADIKGYAIMXFSW 656
           NT A ++D+ GYA++ +SW
Sbjct: 186 NTYAYISDLSGYALVVYSW 204


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 419 PFPNWRRNSAG 387
           P+PNW +N AG
Sbjct: 111 PYPNWAQNKAG 121


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 365 LGKVFAMSVDDLHFXDSVRPNPRVERGPSTPRYGLNQLV 249
           +G V  +SV        +RP    +  P T RYG + L+
Sbjct: 195 VGMVMYISVFKAEVGSKLRPRSSFQGPPFTYRYGFSFLL 233


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 147 YALXDELWRNVSDPMWRQSDL 209
           YA+ +E WR V+D +    D+
Sbjct: 15  YAILNEAWRLVADGILNAKDV 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,762
Number of Sequences: 438
Number of extensions: 4047
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)