BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M09
(830 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 74 2e-13
M95199-1|AAA28894.1| 230|Drosophila melanogaster epidermal grow... 32 0.84
AY089693-1|AAL90431.1| 234|Drosophila melanogaster RH69567p pro... 32 0.84
AE014134-3141|AAZ66477.1| 234|Drosophila melanogaster CG10334-P... 32 0.84
AE014134-3140|AAN11053.2| 234|Drosophila melanogaster CG10334-P... 32 0.84
AE014134-3139|AAN11052.2| 234|Drosophila melanogaster CG10334-P... 32 0.84
AE014134-3138|AAN11051.2| 234|Drosophila melanogaster CG10334-P... 32 0.84
AE014134-3137|AAN11050.2| 234|Drosophila melanogaster CG10334-P... 32 0.84
AE014134-3136|AAG22442.2| 234|Drosophila melanogaster CG10334-P... 32 0.84
AE014134-3135|AAF53831.2| 234|Drosophila melanogaster CG10334-P... 32 0.84
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 30 3.4
BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro... 29 7.8
BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p pro... 29 7.8
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro... 29 7.8
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 29 7.8
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P... 29 7.8
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 29 7.8
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P... 29 7.8
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein. 29 7.8
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 74.1 bits (174), Expect = 2e-13
Identities = 43/110 (39%), Positives = 58/110 (52%)
Frame = +1
Query: 154 WSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIXGREPT 333
W R + G T + + P L +W + + + +TQ LT HGCF YL + + T
Sbjct: 853 WQTRWQESQRGRWTYKLI-PQLTEWADCEHKTVDYHMTQFLTDHGCFRGYLCRFRHVD-T 910
Query: 334 AQCHHCADRDEDDTAERTLARCSGFDEQRAALVAVIGEDLSLPRVVATML 483
AQC +C D E TAE L CS F E+RA LVA+ G LS +VA M+
Sbjct: 911 AQCLYCTDAVE--TAEHILLHCSRFAEERAQLVALAGSPLSPRGLVAAMM 958
>M95199-1|AAA28894.1| 230|Drosophila melanogaster epidermal growth
factor-like proteinprotein.
Length = 230
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 19 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 71
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 72 TFPTYKCPETF 82
>AY089693-1|AAL90431.1| 234|Drosophila melanogaster RH69567p
protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3141|AAZ66477.1| 234|Drosophila melanogaster CG10334-PG,
isoform G protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3140|AAN11053.2| 234|Drosophila melanogaster CG10334-PF,
isoform F protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3139|AAN11052.2| 234|Drosophila melanogaster CG10334-PE,
isoform E protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3138|AAN11051.2| 234|Drosophila melanogaster CG10334-PD,
isoform D protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3137|AAN11050.2| 234|Drosophila melanogaster CG10334-PC,
isoform C protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3136|AAG22442.2| 234|Drosophila melanogaster CG10334-PB,
isoform B protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>AE014134-3135|AAF53831.2| 234|Drosophila melanogaster CG10334-PA,
isoform A protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.84
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -1
Query: 287 PWPVNICVSRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANL 108
PW V C SR V PRS S+ +G + P S R ++T R N+
Sbjct: 23 PWHVEACSSRTVPKPRS-SISSSMSGTALPPTQAPVTSSTTMRTTTTTTP------RPNI 75
Query: 107 TFFFFKNVERF 75
TF +K E F
Sbjct: 76 TFPTYKCPETF 86
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 30.3 bits (65), Expect = 3.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +1
Query: 142 VLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIXG 321
++++W R D S R P + + R + +LTGHG F +LH
Sbjct: 890 LIQSWQNRWDDDSEPGRVTHRFIPYVTLAYRDPSFGFSMRTSFLLTGHGSFNAFLHGRAL 949
Query: 322 REPTAQCHHCADRDED 369
+ TA C C D ED
Sbjct: 950 SDTTA-C-ACGDPYED 963
>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
protein.
Length = 1455
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -1
Query: 263 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANLTFFFFKNV 84
SRKV+HP + + + RR + A +TD R TF +++++
Sbjct: 191 SRKVKHPVESENEECKPSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEVCGKTFSWYRDM 250
Query: 83 ER 78
+R
Sbjct: 251 QR 252
>BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p protein.
Length = 1167
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 275 NICVSRKVRHPRSRPTQSARTGRTASTVRR 186
++ SR +R P +P SA R+ASTVRR
Sbjct: 957 SLSASRPLRMPNGQPLASAAPLRSASTVRR 986
>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
protein.
Length = 1454
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -1
Query: 263 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANLTFFFFKNV 84
SRKV+HP + + + RR + A +TD R TF +++++
Sbjct: 190 SRKVKHPVESENEECKPSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEVCGKTFSWYRDM 249
Query: 83 ER 78
+R
Sbjct: 250 QR 251
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 29.1 bits (62), Expect = 7.8
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Frame = +3
Query: 309 QDXRKGTDGAVPS-LRGPRRG*HSGTHAGALLWIRRATRRPRRGHWRGPLAAARRGYDAR 485
Q+ R+G G P RG RG G G + R+PRRG G +A +D
Sbjct: 200 QNFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGSAEPGVHDQN 259
Query: 486 QRCVLXGDARLLRVHHLAQGGGGXREGELFPFRTDPSPSSR-GPE-----AGIRPYVPAP 647
+ G+ + R GG R F P P R G E RP P P
Sbjct: 260 PEGLQRGEGQGPR-RGGGPPGGPQRRFFRRNFNNGPPPPRRDGGEYIQGQGPPRPQQPRP 318
Query: 648 VRWRSP 665
R R P
Sbjct: 319 RRQRKP 324
>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
protein.
Length = 1266
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -1
Query: 263 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRRDWSLRANLTFFFFKNV 84
SRKV+HP + + + RR + A +TD R TF +++++
Sbjct: 162 SRKVKHPVESENEECKPSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEVCGKTFSWYRDM 221
Query: 83 ER 78
+R
Sbjct: 222 QR 223
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 29.1 bits (62), Expect = 7.8
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Frame = +3
Query: 309 QDXRKGTDGAVPS-LRGPRRG*HSGTHAGALLWIRRATRRPRRGHWRGPLAAARRGYDAR 485
Q+ R+G G P RG RG G G + R+PRRG G +A +D
Sbjct: 200 QNFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGSAEPGVHDQN 259
Query: 486 QRCVLXGDARLLRVHHLAQGGGGXREGELFPFRTDPSPSSR-GPE-----AGIRPYVPAP 647
+ G+ + R GG R F P P R G E RP P P
Sbjct: 260 PEGLQRGEGQGPR-RGGGPPGGPQRRFFRRNFNNGPPPPRRDGGEYIQGQGPPRPQQPRP 318
Query: 648 VRWRSP 665
R R P
Sbjct: 319 RRQRKP 324
>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
protein.
Length = 1644
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 275 NICVSRKVRHPRSRPTQSARTGRTASTVRR 186
++ SR +R P +P SA R+ASTVRR
Sbjct: 1434 SLSASRPLRMPNGQPLASAAPLRSASTVRR 1463
>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
Length = 1644
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 275 NICVSRKVRHPRSRPTQSARTGRTASTVRR 186
++ SR +R P +P SA R+ASTVRR
Sbjct: 1434 SLSASRPLRMPNGQPLASAAPLRSASTVRR 1463
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,651,563
Number of Sequences: 53049
Number of extensions: 625501
Number of successful extensions: 2290
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2289
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -