Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M07
(893 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 42 0.002
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 42 0.002
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 42 0.002
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 42 0.002
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 42 0.002
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 42 0.002
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 38 0.014
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 38 0.025
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 38 0.025
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 38 0.025
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 38 0.025
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 37 0.043
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 37 0.043
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 37 0.043
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 37 0.043
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 37 0.043
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 36 0.057
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 36 0.057
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 36 0.057
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 36 0.075
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 36 0.099
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 36 0.099
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 35 0.13
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 35 0.17
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 35 0.17
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 35 0.17
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 35 0.17
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 35 0.17
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 35 0.17
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 35 0.17
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 35 0.17
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 35 0.17
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 35 0.17
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 33 0.40
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 33 0.70
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 33 0.70
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 33 0.70
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 33 0.70
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 31 1.6
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 31 1.6
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 31 1.6
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 31 1.6
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 31 2.8
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 31 2.8
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 31 2.8
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 31 2.8
AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p pro... 29 8.6
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN+ E+G L + RL +PDV++ N+A G YA V NN S
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
Query: 407 VL 412
L
Sbjct: 173 CL 174
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN+ E+G L + RL +PDV++ N+A G YA V NN S
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
Query: 407 VL 412
L
Sbjct: 173 CL 174
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN+ E+G L + RL +PDV++ N+A G YA V NN S
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150
Query: 407 VL 412
L
Sbjct: 151 CL 152
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN+ E+G L + RL +PDV++ N+A G YA V NN S
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
Query: 407 VL 412
L
Sbjct: 173 CL 174
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN+ E+G L + RL +PDV++ N+A G YA V NN S
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
Query: 407 VL 412
L
Sbjct: 173 CL 174
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN+ E+G L + RL +PDV++ N+A G YA V NN S
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153
Query: 407 VL 412
L
Sbjct: 154 CL 155
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 38.3 bits (85), Expect = 0.014
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +2
Query: 62 VRQNAKTQHHCPS*STRSSQRTIGTPPPHSKIVVNLTLHLGHANIRESESTVRIQADLQM 241
+R ++ + + + SS + + HS I + + L+L E + L++
Sbjct: 263 LRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSD----EKNQLLVTNVWLKL 318
Query: 242 NWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSSVL 412
W D L WN ++ G + R+ +PDV++ N+A G Y V NN S L
Sbjct: 319 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 377
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.025
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN ++ G + R+ +PDV++ N+A G Y V NN S
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
Query: 407 VL 412
L
Sbjct: 425 CL 426
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 37.5 bits (83), Expect = 0.025
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN ++ G + R+ +PDV++ N+A G Y V NN S
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 423
Query: 407 VL 412
L
Sbjct: 424 CL 425
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 37.5 bits (83), Expect = 0.025
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN ++ G + R+ +PDV++ N+A G Y V NN S
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
Query: 407 VL 412
L
Sbjct: 425 CL 426
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 37.5 bits (83), Expect = 0.025
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L++ W D L WN ++ G + R+ +PDV++ N+A G Y V NN S
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
Query: 407 VL 412
L
Sbjct: 425 CL 426
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAATTAG 367
N+ E ++ L++ W D +L W+ ++ G + +++ +PD+VL N A G
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 368 DYALRARVSNNSSVLLHKALGTLTLPSSM 454
+Y +R + S+VL++ L +P ++
Sbjct: 123 NYEVRYK----SNVLIYPTGEVLWVPPAI 147
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 364
++ E + A L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 68 DVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 127
Query: 365 GDYALRARVSNNSSVL 412
G Y V +N S L
Sbjct: 128 GTYHTNIVVKHNGSCL 143
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 364
++ E + A L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 68 DVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 127
Query: 365 GDYALRARVSNNSSVL 412
G Y V +N S L
Sbjct: 128 GTYHTNIVVKHNGSCL 143
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 364
++ E + A L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 68 DVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 127
Query: 365 GDYALRARVSNNSSVL 412
G Y V +N S L
Sbjct: 128 GTYHTNIVVKHNGSCL 143
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 364
++ E + A L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 68 DVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 127
Query: 365 GDYALRARVSNNSSVL 412
G Y V +N S L
Sbjct: 128 GTYHTNIVVKHNGSCL 143
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 36.3 bits (80), Expect = 0.057
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAATTAG 367
N+ E ++ L++ W D +L W+ ++ G + +++ +PD+VL N A G
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 368 DYALRARVSNNSSVLLHKALGTLTLPSSM 454
+Y +R + S+VL++ L +P ++
Sbjct: 123 NYEVRYK----SNVLIYPTGEVLWVPPAI 147
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 36.3 bits (80), Expect = 0.057
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAATTAG 367
N+ E ++ L++ W D +L W+ ++ G + +++ +PD+VL N A G
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 368 DYALRARVSNNSSVLLHKALGTLTLPSSM 454
+Y +R + S+VL++ L +P ++
Sbjct: 123 NYEVRYK----SNVLIYPTGEVLWVPPAI 147
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 36.3 bits (80), Expect = 0.057
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAATTAG 367
N+ E ++ L++ W D +L W+ ++ G + +++ +PD+VL N A G
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 368 DYALRARVSNNSSVLLHKALGTLTLPSSM 454
+Y +R + S+VL++ L +P ++
Sbjct: 123 NYEVRYK----SNVLIYPTGEVLWVPPAI 147
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 35.9 bits (79), Expect = 0.075
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 122 RTIGTPPPHSKIVVNLTL-HLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCST 295
R +G + + L L L N++ T + ++ W D +L WN ++ G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 296 WLVSSERLXRPDVVLLNAA 352
V SE + PD+VL N A
Sbjct: 99 LHVPSEHIWHPDIVLYNNA 117
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 35.5 bits (78), Expect = 0.099
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 152 KIVVNLTL-HLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXR 325
K+ + L L L N++ T + ++ +W D +L W E+G L V S+ + R
Sbjct: 67 KVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWR 124
Query: 326 PDVVLLNAA 352
PD+VL N A
Sbjct: 125 PDIVLYNNA 133
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.099
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 364
N+ E + L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 83 NLDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 142
Query: 365 GDYALRARVSNNSSVL 412
G Y V +N S L
Sbjct: 143 GTYHTNIVVKHNGSCL 158
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 35.1 bits (77), Expect = 0.13
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 122 RTIGTPPPHSKIVVNLTL-HLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCST 295
R +G + + L L L N++ T + ++ W D +L WN ++ G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 296 WLVSSERLXRPDVVLLNAA 352
V SE + PD+VL N A
Sbjct: 99 LHVPSEHIWLPDIVLYNNA 117
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
++ +W D +L W E+G L V S+ + RPD+VL N A
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 99
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
++ +W D +L W E+G L V S+ + RPD+VL N A
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 118
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 155 IVVNLTLHLGHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLX 322
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 323 RPDVVLLNAA 352
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 155 IVVNLTLHLGHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLX 322
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 323 RPDVVLLNAA 352
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 155 IVVNLTLHLGHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLX 322
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 323 RPDVVLLNAA 352
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
++ +W D +L W E+G L V S+ + RPD+VL N A
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 118
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 155 IVVNLTLHLGHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLX 322
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 323 RPDVVLLNAA 352
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 155 IVVNLTLHLGHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLX 322
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 323 RPDVVLLNAA 352
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L + W D L WN E+ G ++ +L +PDV++ N+A G Y V +N S
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
Query: 407 VL 412
L
Sbjct: 142 CL 143
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNSS 406
L + W D L WN E+ G ++ +L +PDV++ N+A G Y V +N S
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
Query: 407 VL 412
L
Sbjct: 142 CL 143
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.40
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA 352
N+ E + L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 83 NLDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSA 137
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA 352
L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSA 136
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA 352
L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSA 122
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA 352
L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSA 122
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAA 352
L + W D L WN E+ G ++ +L +PDV++ N+A
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSA 122
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLN 346
++ W D +L W+ E+G L V SE + PD+VL N
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLN 346
++ W D +L W+ E+G L V SE + PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLN 346
++ W D +L W+ E+G L V SE + PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLN 346
++ W D +L W+ E+G L V SE + PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLN 346
L + W D L WN E+ G ++ +L +PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 200 ESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTAGD-- 370
++ S ++ + + M+W D RL W ++G ++ R+ +P + +LN A + G
Sbjct: 55 QTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVL 114
Query: 371 YALRARVSNNSSVLLH 418
+ V N S+ L+
Sbjct: 115 QSYELMVYANGSITLY 130
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLN 346
L + W D L WN E+ G ++ +L +PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 200 ESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTAGD-- 370
++ S ++ + + M+W D RL W ++G ++ R+ +P + +LN A + G
Sbjct: 252 QTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVL 311
Query: 371 YALRARVSNNSSVLLH 418
+ V N S+ L+
Sbjct: 312 QSYELMVYANGSITLY 327
>AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p
protein.
Length = 1012
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -2
Query: 307 GHQPSAAAPLPCVPXQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVRGGSPD 128
GHQ APL QSF+D + K +GG TN + +Q Q D ++ + D
Sbjct: 784 GHQIGKPAPLFAKLEQSFIDELKGK-----YGGAQATNDAAQAVQAQADKVRELKASTKD 838
Query: 127 RTL 119
+ +
Sbjct: 839 KAI 841
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,028,666
Number of Sequences: 53049
Number of extensions: 636173
Number of successful extensions: 1715
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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