Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M07
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 42 5e-04
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 41 0.001
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 41 0.001
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 40 0.002
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 39 0.004
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 39 0.004
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 38 0.007
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 38 0.010
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 38 0.010
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 38 0.013
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 38 0.013
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 38 0.013
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.013
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 37 0.017
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 37 0.022
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 37 0.022
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 37 0.022
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 37 0.022
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 36 0.039
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 36 0.039
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 36 0.039
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 36 0.052
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.052
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.052
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 35 0.068
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 35 0.090
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 35 0.090
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 34 0.12
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 34 0.12
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 34 0.12
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 34 0.12
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 34 0.12
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 34 0.16
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 34 0.16
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 34 0.16
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 33 0.21
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 33 0.21
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 33 0.21
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 33 0.21
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 33 0.36
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 33 0.36
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 33 0.36
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 33 0.36
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 33 0.36
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 32 0.48
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 32 0.48
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.64
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 32 0.64
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 31 0.84
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 31 0.84
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 31 0.84
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 31 1.5
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 30 1.9
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 30 1.9
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 30 1.9
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.4
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 29 3.4
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 29 3.4
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 29 3.4
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 29 4.5
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 29 5.9
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 29 5.9
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
L+M W DK+L WN +WG ++ + S+++ PD+VL N A
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNA 121
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAA 352
N+ E ++ L M W D +L WN E+G S V S+R+ PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAA 352
N+ E ++ L M W D +L WN E+G S V S+R+ PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 146 HSKIVVNLTLHLGH-ANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERL 319
++ + + L L ++ E + + ++ L +W+D RL WN E+G T + E L
Sbjct: 28 NNTLTIEFKLRLDQIVDVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEML 87
Query: 320 XRPDVVLLNAA 352
PD++L N A
Sbjct: 88 WLPDIILYNNA 98
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG--CSTWLVSS 310
PP + V L L H I E + T+ + + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 311 ERLXRPDVVLLNAAATTAGDYALR--ARVSNNSSVLL-HKALGTLT 439
+++ PD+++ N A A+R AR+ N +++ H A+ T++
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVS 187
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG--CSTWLVSS 310
PP + V L L H I E + T+ + + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 311 ERLXRPDVVLLNAAATTAGDYALR--ARVSNNSSVLL-HKALGTLT 439
+++ PD+++ N A A+R AR+ N +++ H A+ T++
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVS 187
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG--CSTWLVSS 310
PP + V L L H I E + T+ + + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 311 ERLXRPDVVLLNAAATTAGDYALR--ARVSNNSSVLL-HKALGTLT 439
+++ PD+++ N A A+R AR+ N +++ H A+ T++
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVS 187
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 161 VNLTLHLGHAN-IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLXRPDVV 337
VN+ L + H + E E T + + WID+ + W+A + + +S+ L +P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 338 LLNAA 352
L N+A
Sbjct: 114 LYNSA 118
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 200 ESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAA 352
E + ++ L +NW+D RL WN W + R+ +PD++L+N A
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNA 205
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTA-- 364
+ E + V I L++ WID+ L W+ ++G S V + ++ +PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 365 GDYALRARVSNNSSVLLHKALGT 433
+ A V N V+L +++ T
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMIT 151
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTA-- 364
+ E + V I L++ WID+ L W+ ++G S V + ++ +PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 365 GDYALRARVSNNSSVLLHKALGT 433
+ A V N V+L +++ T
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMIT 151
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 143 PHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSER 316
P+ + + L L L ++ E + + L+ WID++L W+ + G + V E
Sbjct: 48 PNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEM 107
Query: 317 LXRPDVVLLNAA 352
+ PD+VL N A
Sbjct: 108 IWVPDIVLYNNA 119
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 143 PHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSER 316
P+ + + L L L ++ E + + L+ WID++L W+ + G + V E
Sbjct: 48 PNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEM 107
Query: 317 LXRPDVVLLNAA 352
+ PD+VL N A
Sbjct: 108 IWVPDIVLYNNA 119
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 143 PHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSER 316
P+ + + L L L ++ E + + L+ WID++L W+ + G + V E
Sbjct: 48 PNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEM 107
Query: 317 LXRPDVVLLNAA 352
+ PD+VL N A
Sbjct: 108 IWVPDIVLYNNA 119
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 161 VNLTLHLGHAN-IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLXRPDVV 337
V + L++ H + E E T + L +W D+ L W ST ++S +L +P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 338 LLNAA 352
L N+A
Sbjct: 114 LYNSA 118
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 233 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
L+M W D RL W+ G WG L V +++ PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 158 VVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDV 334
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++ +P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 335 VLLNAAA--TTAGDYALRARV 391
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 158 VVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDV 334
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++ +P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 335 VLLNAAA--TTAGDYALRARV 391
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 155 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRP 328
+VV L L ++ E + LQ +W+D +L W+ E+ G V S+ + P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 329 DVVLLNAA 352
DVVL N A
Sbjct: 112 DVVLYNNA 119
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 155 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRP 328
+VV L L ++ E + LQ +W+D +L W+ E+ G V S+ + P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 329 DVVLLNAA 352
DVVL N A
Sbjct: 112 DVVLYNNA 119
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
N+ E E + L M W D +L W+ ++ T + V+ E++ PD+VL N A
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
N+ E E + L M W D +L W+ ++ T + V+ E++ PD+VL N A
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
N+ E E + L M W D +L W+ ++ T + V+ E++ PD+VL N A
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG--CSTWLVSS 310
PP + V L L H I E + T+ + + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 311 ERLXRPDVVLLN 346
+++ PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG--CSTWLVSS 310
PP + V L L H I E + T+ + + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 311 ERLXRPDVVLLN 346
+++ PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG--CSTWLVSS 310
PP + V L L H I E + T+ + + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 311 ERLXRPDVVLLN 346
+++ PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +2
Query: 137 PPPHSKIVVNLTLHLGHANIRESESTVRIQAD---LQMNWIDKRLXWNAGEWGCSTWL-V 304
P HSK +N+T I + + +I ++++W+D +L W+ + T + +
Sbjct: 17 PSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHI 76
Query: 305 SSERLXRPDVVLLNAA 352
S+++ +PD++L N A
Sbjct: 77 PSDKIWKPDIILYNNA 92
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 34.7 bits (76), Expect = 0.090
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWG---CSTWLVSSERLXRPDVVLLNAAA 355
++ E V + A L W D +L W ++G + SS+ + +PDV+L N+AA
Sbjct: 64 DVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAA 121
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +2
Query: 149 SKIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLXRP 328
+K+V ++ + + I E V++ ++W D + W+ +WG S ++ P
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTP 142
Query: 329 DVVLLNAAATT 361
++V +N +T+
Sbjct: 143 NIVQINGGSTS 153
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 146 HSK-IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 316
HS+ + V+L + L ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 317 LXRPDVVLLNAAAT 358
+ +PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 146 HSK-IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 316
HS+ + V+L + L ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 317 LXRPDVVLLNAAAT 358
+ +PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +2
Query: 146 HSKIV-VNLTLHLGH-ANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 316
H K V V L L L ++ E + + Q W D +L W+ E+G T L +
Sbjct: 46 HRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLRWSPEEYGNITTLQIPHGT 105
Query: 317 LXRPDVVLLNAA-ATTAGDYALRARVSNNSSVL 412
L +PD++L N+A + + VS+N VL
Sbjct: 106 LWKPDILLFNSANEHFDASFPVHMVVSSNGDVL 138
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 146 HSK-IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 316
HS+ + V+L + L ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 317 LXRPDVVLLNAAAT 358
+ +PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 146 HSK-IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 316
HS+ + V+L + L ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 317 LXRPDVVLLNAAAT 358
+ +PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 352
++ E V + A L+ +W+D L W ++G T L +L PDV++ N+A
Sbjct: 64 DVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTPDVLMYNSA 118
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 215 VRIQADLQMNWIDKRLXWNAGEWGCSTW-LVSSERLXRPDV 334
+ I L+++W D+RL WN EW L S RL PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 215 VRIQADLQMNWIDKRLXWNAGEWGCSTW-LVSSERLXRPDV 334
+ I L+++W D+RL WN EW L S RL PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 155 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRP 328
++V + L L N+ E + + L + W D ++ WN +G VS +++ P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 329 DVVLLNAA 352
D+VL N A
Sbjct: 116 DIVLFNNA 123
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAA 355
++ E + L+M W D +L W ++ G T + S+ + PD+VL N AA
Sbjct: 76 DVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 155 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRP 328
++V + L L N+ E + + L + W D ++ WN +G VS +++ P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 329 DVVLLNAA 352
D+VL N A
Sbjct: 116 DIVLFNNA 123
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 155 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRP 328
++V + L L N+ E + + L + W D ++ WN +G VS +++ P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 329 DVVLLNAA 352
D+VL N A
Sbjct: 116 DIVLFNNA 123
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAA 355
++ E + L+M W D +L W ++ G T + S+ + PD+VL N AA
Sbjct: 76 DVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 155 IVVNLTLH-LGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSER-LXRP 328
+++N++++ + + +E T+ ++ + W D+ L WN ++ TWL E L P
Sbjct: 53 LIINISMNTMSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 329 DVVLLNAAAT 358
D + + T
Sbjct: 112 DTTVSTSIDT 121
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTAGD 370
+ E++ + + ++ W D+ L WN ++G + V SE + +PD+++ N A +
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 123
Query: 371 YALR--ARVSNNSSVLLHKALGT 433
++ ++ + + L +A+ T
Sbjct: 124 NEMQTNVQIEHTGKISLFRAIIT 146
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTAGD 370
+ E++ + + ++ W D+ L WN ++G + V SE + +PD+++ N A +
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 123
Query: 371 YALR--ARVSNNSSVLLHKALGT 433
++ ++ + + L +A+ T
Sbjct: 124 NEMQTNVQIEHTGKISLFRAIIT 146
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNAAATTAGD 370
+ E++ + + ++ W D+ L WN ++G + V SE + +PD+++ N A +
Sbjct: 48 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 107
Query: 371 YALR--ARVSNNSSVLLHKALGT 433
++ ++ + + L +A+ T
Sbjct: 108 NEMQTNVQIEHTGKISLFRAIIT 130
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 140 PPHSKIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSER 316
PP +++ + + + L ++ E E V D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 317 LXRPDVVLLNA 349
+ P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +2
Query: 155 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL---VSSERLX 322
+VV++ ++L ++ E + + A ++ W D +L W+ E+G + ++ +
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 323 RPDVVLLNAA 352
+PDV+L N+A
Sbjct: 113 KPDVLLYNSA 122
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 176 HLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLXRPDV 334
+L ++E + + + ++ W D RL WNA W +T + + +++ P +
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIYMKQDKVWSPTI 133
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +2
Query: 113 SSQRTIGTP-PPHSKIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGC 289
S T GT PP +I + L++ + + E E D + +W D RL W+ ++G
Sbjct: 69 SVPETNGTVHPPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGG 127
Query: 290 STWL-VSSERLXRPDVVLLNAAATTAGD--YALRARVSNNSSVLLHKA 424
+ V ++ P+ +++ + D Y A + +N S+ ++ A
Sbjct: 128 INHIYVPRSKVWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSIGMYIA 175
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 179 LGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSS 310
L H + E + I L+++W D RL WN W + +V S
Sbjct: 69 LQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKNKLVVHS 112
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 110 RSSQRTIGTPPPHSKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG 286
R + T+ + P +VV+L + L N+ E E + + A L+ W D+ L W +
Sbjct: 35 REERPTLDSSKP---VVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLRWEPTAYE 91
Query: 287 CSTWL-VSSERLXRPDVVLLNA 349
T L + L PD++L N+
Sbjct: 92 NVTDLRHPPDALWTPDILLYNS 113
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 155 IVVNLTLH-LGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSER-LXRP 328
+ +N++++ + + +E T+ + + W D+ L WN ++ TWL E L P
Sbjct: 53 LFINISINSMSFLTLDPAEETINFSGEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 329 DVVLLNAAAT 358
D + + T
Sbjct: 112 DTTVSTSIDT 121
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAATT--A 364
+ E ++I +W D L W+ EW G ++ ++ PD + N T
Sbjct: 75 VNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWIPDGYIFNTVEETEPL 134
Query: 365 GDYALRARVSNNSSVLLHKALGTLTLPSSMXXXXF 469
++ R R V +K L LT P S+ F
Sbjct: 135 ENHNARVRYDGRVEVDFNK-LVDLTCPMSVLSFPF 168
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRPDVVLLNAAATT--A 364
+ E ++I +W D L W+ EW G ++ ++ PD + N T
Sbjct: 75 VNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWIPDGYIFNTVEETEPL 134
Query: 365 GDYALRARVSNNSSVLLHKALGTLTLPSSMXXXXF 469
++ R R V +K L LT P S+ F
Sbjct: 135 ENHNARVRYDGRVEVDFNK-LVDLTCPMSVLSFPF 168
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 173 LHLGHAN-IRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXR 325
LH+ H + I++ + +++ W+D+RL WN + G T+ + + R
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 152 KIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRP 328
K+ ++++L+ + E +++ + W D+ L WN E+G ++ ++ L P
Sbjct: 79 KVHISISLYQ-IIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 329 DVVLLNA 349
D L N+
Sbjct: 138 DTYLYNS 144
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 167 LTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLXRP 328
L +L ++E E V + +L W D RL WN+ + T V E++ P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 152 KIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRP 328
K+ ++++L+ + E +++ + W D+ L WN E+G ++ ++ L P
Sbjct: 79 KVHISISLYQ-IIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 329 DVVLLNA 349
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 152 KIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRP 328
K+ ++++L+ + E +++ + W D+ L WN E+G ++ ++ L P
Sbjct: 79 KVHISISLYQ-IIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 329 DVVLLNA 349
D L N+
Sbjct: 138 DTYLYNS 144
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 194 IRESESTVRIQADLQMNWIDKRLXWNAGEW 283
+ E E V + +L W D RL WNA ++
Sbjct: 87 VNEPEEQVSVVLELMEYWYDPRLSWNASDY 116
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNA 349
+I E + L+M+W D L W+ E+G + + +PDV+L N+
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWG------CSTWLVSSERLXRPDVVLLNAA 352
++ E + I A + +W D +L W+ +G S +S +L RPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 353 ATT-AGDYALRARVSNNSSV 409
+ + Y+ R VS+N V
Sbjct: 119 SESFDSTYSSRFIVSSNGDV 138
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 161 VNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDV 334
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++ PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 335 VLLNA 349
L N+
Sbjct: 193 YLYNS 197
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 191 NIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLXRPDVVLLNA 349
+I E + L+M+W D L W+ E+G + + +PDV+L N+
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 200 ESESTVRIQADLQMNWIDKRLXWNAGEWGC-STWL-VSSERLXRPDVVLLN 346
+++ T++ + + W D L WN + W+ +S+ R PDV+ N
Sbjct: 67 QTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 215 VRIQADLQMNWIDKRLXWNAGEWGCST---WLVSSERLXRPDVVLLNAAA 355
+ + A L+ W+D RL W+ ++ T + ++ RPD++L N+A+
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSAS 61
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 149 SKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLX 322
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 323 RPDVVLLNA 349
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 149 SKIVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLX 322
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 323 RPDVVLLNA 349
PD L N+
Sbjct: 110 LPDTTLYNS 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,853,016
Number of Sequences: 27780
Number of extensions: 287767
Number of successful extensions: 771
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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