Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M05
(846 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 31 2.0
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 31 2.6
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 31 2.6
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 31 2.6
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 31 2.6
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 31 2.6
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 31 2.6
AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p pro... 30 3.5
AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA... 30 3.5
AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC... 30 3.5
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ... 29 8.0
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA... 29 8.0
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 1142 RTSSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 1197
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 1198 LAGSGPPP 1205
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 30.7 bits (66), Expect = 2.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 310 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 365
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 366 LAGSGPPP 373
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 1197
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 1198 LAGSGPPP 1205
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 30.7 bits (66), Expect = 2.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 1197
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 1198 LAGSGPPP 1205
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 1197
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 1198 LAGSGPPP 1205
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 1197
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 1198 LAGSGPPP 1205
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 30.7 bits (66), Expect = 2.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLT-PLXHWG 728
R P Q P S+H P + P S P T PG PP ++P A+ T PL G
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLP--G 1197
Query: 729 MAKGVSPP 752
+A PP
Sbjct: 1198 LAGSGPPP 1205
>AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p
protein.
Length = 292
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +3
Query: 504 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TP--YYKEFAPGL 668
Y + P H PL + R H H P S P P P+PS P +P YY + PG
Sbjct: 126 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQ--PGA 183
Query: 669 KPPLSSEAPSAYLTP 713
P + P + P
Sbjct: 184 HSPSQAMYPLDFFPP 198
>AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA,
isoform A protein.
Length = 557
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +3
Query: 504 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TP--YYKEFAPGL 668
Y + P H PL + R H H P S P P P+PS P +P YY + PG
Sbjct: 349 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQ--PGA 406
Query: 669 KPPLSSEAPSAYLTP 713
P + P + P
Sbjct: 407 HSPSQAMYPLDFFPP 421
>AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC,
isoform C protein.
Length = 891
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +3
Query: 504 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TP--YYKEFAPGL 668
Y + P H PL + R H H P S P P P+PS P +P YY + PG
Sbjct: 683 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQ--PGA 740
Query: 669 KPPLSSEAPSAYLTP 713
P + P + P
Sbjct: 741 HSPSQAMYPLDFFPP 755
>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
initiation factoreIF4G protein.
Length = 1666
Score = 29.1 bits (62), Expect = 8.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 231 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612
>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
protein.
Length = 1345
Score = 29.1 bits (62), Expect = 8.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 231 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,365,593
Number of Sequences: 53049
Number of extensions: 840885
Number of successful extensions: 2923
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2922
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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