Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M05
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.8
AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical ... 30 1.8
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.1
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.2
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 29 4.2
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 29 4.2
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 29 4.2
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 29 4.2
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 29 5.5
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical
protein E04A4.1 protein.
Length = 333
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 566 RSSNPRFHTPTTPDLTSISINPLNAVLQGVRAGVKASVV 682
+SSN FH DL S+ NA LQ R G+KA V
Sbjct: 17 KSSNYVFHRMLVADLIGFSLTSKNAKLQTKRLGLKAEDV 55
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +3
Query: 525 ASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAY 704
A S P L Q I D I P P PS PYYK + P S A +
Sbjct: 527 ARSQQPKMIPLEQTQDSIEDDIGPSPMFQGPEPSRRGVPYYKNAYRRTELP-SRHAQHSP 585
Query: 705 LTPLXHWGMAKGVSPP 752
LTP ++ ++PP
Sbjct: 586 LTPSTSTSSSQLLAPP 601
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +3
Query: 561 QPDHQIPDSIHQP-PQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAPSAYLTP 713
QP P P PQ P P+ P PY + P PPL+S +A P
Sbjct: 44 QPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVP 95
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 558 HQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPLSSEAP 695
+QP + P + +QPP PFP TPYY + G+ P ++P
Sbjct: 4 NQPPNYPPGNPNQPP----PFPP---TPYYPMYQAGMPMPYIPQSP 42
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 618 FPSIP*TPYYKEFAPGLKPP----LSSEAPSAYLTPLXHWGMAKGV-SPPLFSSE 767
FP TPY P + PP SS P+A P WG A V +PP + ++
Sbjct: 51 FPESYVTPYQASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPSYGAQ 105
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 618 FPSIP*TPYYKEFAPGLKPP----LSSEAPSAYLTPLXHWGMAKGV-SPPLFSSE 767
FP TPY P + PP SS P+A P WG A V +PP + ++
Sbjct: 51 FPESYVTPYQASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPSYGAQ 105
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 618 FPSIP*TPYYKEFAPGLKPP----LSSEAPSAYLTPLXHWGMAKGV-SPPLFSSE 767
FP TPY P + PP SS P+A P WG A V +PP + ++
Sbjct: 51 FPESYVTPYQASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPSYGAQ 105
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 648 KEFAPGLKPPLSSEAPSAYLTPLXHWGMAKGV-SPPLFSSE 767
K P PP SS P+A P WG A V +PP + ++
Sbjct: 91 KSVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPSYGAQ 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,373,305
Number of Sequences: 27780
Number of extensions: 388386
Number of successful extensions: 1258
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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