Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_M04
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 274 4e-74
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.1
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.1
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.1
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.1
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.1
U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical p... 28 9.4
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 274 bits (673), Expect = 4e-74
Identities = 136/234 (58%), Positives = 170/234 (72%), Gaps = 1/234 (0%)
Frame = +2
Query: 128 WHEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLP 307
+ EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+RKA++ HL NP+LEKLLP
Sbjct: 21 FEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLP 80
Query: 308 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 487
HI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP V +P NTG+GPEKTSFFQA
Sbjct: 81 HIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQA 140
Query: 488 LSIPTKISKGTIEIINDVHILKPGDXVGASEATLLNMLNISPFSYGLVVKQVYDSGNYFC 667
L IPTKI++GTIEI+NDVH++K GD VGASE+ LLNML ++PFSYGLVV+QVYD G +
Sbjct: 141 LQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYT 200
Query: 668 T*NSGHQTXGFPCQVPSWSC*CTALSLAIGYPTIAS-ARIHRQWFQXFLAIXAV 826
T + S ++SLA+ YPT+AS A Q L + AV
Sbjct: 201 PEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAV 254
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLARVPK 144
M RED++TWK+NYF K+++L PK
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPK 26
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 57.6 bits (133), Expect = 1e-08
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 3/180 (1%)
Frame = +2
Query: 134 EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLP 307
+Y FI N+ S + IR + +S GKN ++ A+ + A L K
Sbjct: 36 QYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASA 95
Query: 308 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQ 484
+KG G +FT EV + E + AR G +A +VV+P + +
Sbjct: 96 ILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLR 155
Query: 485 ALSIPTKISKGTIEIINDVHILKPGDXVGASEATLLNMLNISPFSYGLVVKQVYDSGNYF 664
L +PTK+ KG I + + K G+ + +A +L + + L+ K ++ + F
Sbjct: 156 KLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFKAHWNKKDGF 215
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +3
Query: 225 CSWEKTL*CAKP-SKTTWTTIQPSRNCCHTSRATLASCSPAET-SWRSVTNCWRTKSKLQ 398
CSW P S+T + QP+ N R C+P +S W T S+
Sbjct: 273 CSWMIDPLATDPQSRTHYLQCQPAPNNLFCGRWQRMPCAPGTVFDVQSQVCVWDTNSQPG 332
Query: 399 LVPVPLPHCQSSFP 440
+P P P+ + P
Sbjct: 333 TLPTPAPYVSTQAP 346
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 282 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 419
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 282 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 419
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 282 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 419
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 282 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 419
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 432 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 322
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical
protein C33F10.13 protein.
Length = 363
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 7 KSCVLSCP*ISSKSYATLSRMGREDKATWKSNYFVKI 117
+ C LSCP SS+S L + + + S+YF K+
Sbjct: 177 RRCSLSCPPFSSQSLPDLLSLTEQISFNFDSSYFSKL 213
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 371 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 520
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,832,957
Number of Sequences: 27780
Number of extensions: 471876
Number of successful extensions: 1442
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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