Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_M01
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.    33   0.50 
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA...    33   0.50 
AY071175-1|AAL48797.1|  124|Drosophila melanogaster RE22927p pro...    29   8.2  
AY060357-1|AAL25396.1|  313|Drosophila melanogaster HL08049p pro...    29   8.2  
AE013599-3982|AAF47292.2|  313|Drosophila melanogaster CG18506-P...    29   8.2  

>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
          Length = 2412

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 190  KRDQDSTDDFEHLDRE--TKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAE 351
            + D D  DD +++D E  T +D  +          Q  LE ER     H+PPS+A+
Sbjct: 1968 RNDDDDDDDEDYVDDEPPTDEDKFERLNRRRHEMHQRMLESERRQMERHQPPSLAK 2023


>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
            protein.
          Length = 2224

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 190  KRDQDSTDDFEHLDRE--TKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAE 351
            + D D  DD +++D E  T +D  +          Q  LE ER     H+PPS+A+
Sbjct: 1911 RNDDDDDDDEDYVDDEPPTDEDKFERLNRRRHEMHQRMLESERRQMERHQPPSLAK 1966


>AY071175-1|AAL48797.1|  124|Drosophila melanogaster RE22927p
           protein.
          Length = 124

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 249 PGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGPH 368
           PGG +G  SS  + ++ G G+++++GT A        G H
Sbjct: 82  PGGGSGIGSSMSNMQYNGSGSYSKNGTVAMHNYYVKNGHH 121


>AY060357-1|AAL25396.1|  313|Drosophila melanogaster HL08049p
           protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +3

Query: 468 SDTGTTDA*SSRPDTGAGPRARSACXRETCGA-QSGARPSSLSLSRCRKRNPSXEK 632
           S +GT  + ++ P TG GP A SA   +   A   G+ PS    S   ++ P  E+
Sbjct: 77  STSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRASSFIRKKPPLER 132


>AE013599-3982|AAF47292.2|  313|Drosophila melanogaster CG18506-PA
           protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +3

Query: 468 SDTGTTDA*SSRPDTGAGPRARSACXRETCGA-QSGARPSSLSLSRCRKRNPSXEK 632
           S +GT  + ++ P TG GP A SA   +   A   G+ PS    S   ++ P  E+
Sbjct: 77  STSGTASSTATAPATGCGPAATSASDSDRHQAVGGGSAPSRKRASSFIRKKPPLER 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,022,879
Number of Sequences: 53049
Number of extensions: 726046
Number of successful extensions: 2707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)