Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_L24
         (842 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    68   5e-11
BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786...    33   1.3  
BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.       33   1.3  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 67.7 bits (158), Expect = 5e-11
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = -2

Query: 598 MIGRADIEGSKSNVAMNXWLPQASYPCGNFSGTS 497
           MIGRADIEGSKS+VAMN W PQASYPCGNFS TS
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTS 34


>BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786
           protein.
          Length = 782

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 7   RRERAWXNXRGKKTLLELDSSSGIVRRHXRCXISGRSFR 123
           R  RAW     K+   ++  SS  V+RH RC + G+SFR
Sbjct: 213 RTRRAWEKFN-KRAETQMPWSSPRVQRHFRCGVCGKSFR 250


>BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.
          Length = 753

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 7   RRERAWXNXRGKKTLLELDSSSGIVRRHXRCXISGRSFR 123
           R  RAW     K+   ++  SS  V+RH RC + G+SFR
Sbjct: 184 RTRRAWEKFN-KRAETQMPWSSPRVQRHFRCGVCGKSFR 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,628,178
Number of Sequences: 237096
Number of extensions: 2615795
Number of successful extensions: 5263
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5260
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)