Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_L21
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387...   166   2e-41
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170...   161   5e-40

>12_02_1200 +
           26937624-26937674,26937913-26938005,26938582-26938728,
           26940299-26940379,26940711-26940849,26940977-26941013,
           26941095-26941202,26941434-26941533,26941638-26941783,
           26941862-26941953,26942086-26942180,26942435-26942531,
           26942623-26942766,26942912-26943129,26943213-26943323
          Length = 552

 Score =  166 bits (403), Expect = 2e-41
 Identities = 80/148 (54%), Positives = 102/148 (68%)
 Frame = +3

Query: 375 EQTVPPTIPVXELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKXALDXLHKDIYQE 554
           +QT PP+IP+ ELFP G+FPEG+I  +      D+     R TSEEK  L+ L K +Y  
Sbjct: 190 QQTDPPSIPIDELFPSGDFPEGEIQQYK-----DDNLW--RTTSEEKRELERLQKPMYNA 242

Query: 555 IRHAAEAHRQTXKHIRNWIKPGMTMIXICEELXNTAXRLIGEDGLKAGLAFPTGCSRNHC 734
           +R AAE HRQ  KH+R+ +KPGM MI +CE L N   +LI E+GL+AG+AFPTGCS N  
Sbjct: 243 VRRAAEVHRQVRKHMRSILKPGMLMIDLCETLENMVRKLIKENGLQAGIAFPTGCSLNWV 302

Query: 735 AXHYTPNTGDTTXLXYDDVLXIDFGTXI 818
           A H+TPN+GD T L YDDV+ +DFGT I
Sbjct: 303 AAHWTPNSGDKTVLQYDDVMKLDFGTHI 330


>08_02_1441 -
           27116242-27116354,27116646-27116742,27116841-27117058,
           27117279-27117422,27117512-27117608,27117932-27118026,
           27118140-27118231,27118326-27118471,27118565-27118664,
           27118857-27118964,27119040-27119085,27119210-27119345,
           27119847-27120044
          Length = 529

 Score =  161 bits (392), Expect = 5e-40
 Identities = 80/148 (54%), Positives = 100/148 (67%)
 Frame = +3

Query: 375 EQTVPPTIPVXELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKXALDXLHKDIYQE 554
           +QT PP+IPV ELFP G FPEG+I  +      D+     R TSEEK  L+ L K +Y  
Sbjct: 134 QQTDPPSIPVDELFPSGEFPEGEIQHYK-----DDNLW--RTTSEEKRELERLQKPMYNA 186

Query: 555 IRHAAEAHRQTXKHIRNWIKPGMTMIXICEELXNTAXRLIGEDGLKAGLAFPTGCSRNHC 734
           +R AAE HRQ  K++R+ +KPGM MI +CE L N   +LI E+GL+AG+AFPTGCS N  
Sbjct: 187 VRRAAEVHRQVRKYMRSILKPGMLMIDLCETLENMVRKLIKENGLEAGIAFPTGCSLNCV 246

Query: 735 AXHYTPNTGDTTXLXYDDVLXIDFGTXI 818
           A H+TPN GD T L YDDV+ +DFGT I
Sbjct: 247 AAHWTPNGGDKTVLQYDDVMKLDFGTHI 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,220,788
Number of Sequences: 37544
Number of extensions: 282635
Number of successful extensions: 493
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)