Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L18
(870 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 46 5e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 4e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 42 7e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 2e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 4e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 6e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 2.1
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.4
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 6.4
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 6.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGS 445
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGS 445
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGS 445
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 46.0 bits (104), Expect = 5e-07
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGEWGCSTWLASXERLWRPDVVLLN 385
+D+RL++ G+ + ++ R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 468 TLALQXXMHXXNWPNDMQTCPFTLGS 545
T+ M+ N+P D Q CP GS
Sbjct: 125 TIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAA-AXTA 403
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 152 LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW- 322
L YDRD P+ K ++ L ++H N+ E TV L++ W L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 323 GCSTWLASXERLWRPDVVL 379
++ +W PD+V+
Sbjct: 104 SINSIRVKSYEIWVPDIVM 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Frame = +2
Query: 92 AIASAAEYENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RIQADLQMNWIDKRLSWNAGEWGCSTWLA-SXERLWRPDVVLLNAA-AXTAGDYALRARV 430
L++ W D + WN ++G L RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 431 SNNGS 445
NNG+
Sbjct: 131 KNNGT 135
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 41.9 bits (94), Expect = 7e-06
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKR 298
+ D LL+ Y+R P S +VV L L L N+++ T + L+ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 81
Query: 299 LSWNAGEWGCSTWL-ASXERLWRPDVVLLNAA 391
W+ E+G T L E +W PD+VL N A
Sbjct: 82 FQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.7 bits (91), Expect = 2e-05
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Frame = +2
Query: 86 TCAIASAAEYENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 244
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 245 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLASXERLWRPDVVLLNAA 391
T + ++ W D +L WN ++G T E +W PD+VL N A
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.9 bits (89), Expect = 3e-05
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = +2
Query: 92 AIASAAEYENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESES 250
++A +E + D LL+ Y+R P LT+ L N++
Sbjct: 21 SVAGLKIFEANPDTKRLYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVM 80
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-ASXERLWRPDVVLLNAA 391
T + ++ W D +L WN E+G L E +W PD+VL N A
Sbjct: 81 TTNVW--VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.5 bits (88), Expect = 4e-05
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAAXTAGDYALR 421
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAA 391
+L N A
Sbjct: 92 TILYNNA 98
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 38.7 bits (86), Expect = 7e-05
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 298
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 28 LYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 85
Query: 299 LSWNAGEWGCSTWL-ASXERLWRPDVVLLNAA 391
L W+ E+G L + +WRPD+VL N A
Sbjct: 86 LKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.3 bits (85), Expect = 9e-05
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Frame = +2
Query: 95 IASAAEYENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRI 262
+ + Y++ T+L + L YD + P S +I N+T+ L + + S + +
Sbjct: 32 LLNCKNYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMEL 91
Query: 263 QADLQMNWIDKRLSWNAGEW-GCSTWLASXERLWRPDVVLLNAAAXT---AGDYALRARV 430
+ + + W D LSW ++ G + + +W PD+ + N+ T G V
Sbjct: 92 HSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLV 151
Query: 431 SNNGSVSXI 457
++GSVS +
Sbjct: 152 FSSGSVSCV 160
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.1 bits (82), Expect = 2e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-ASXERLWRPDVVLLNAA 391
W E+G L + +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.1 bits (82), Expect = 2e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-ASXERLWRPDVVLLNAA 391
W E+G L + +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 35.5 bits (78), Expect = 6e-04
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 292
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSWNAGEWGCSTWLASXERLWRPDVVLLNAAAXTAGDYAL---RARVSNNGSVSXIXR 463
RLS+ S + ER+WRPD N + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDI 472
L I
Sbjct: 156 LTI 158
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 468 TLALQXXMHXXNWPNDMQTCPFTLGS 545
T+ + M N+P D Q+CP LGS
Sbjct: 157 TIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLASXERLWRPDVVLLNAAAXTAGDYAL---RARVSNNGSVSXIXR 463
L +N G T L R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDIS 475
+ ++
Sbjct: 154 ISLT 157
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 468 TLALQXXMHXXNWPNDMQTCPFTLGSRMHNXD 563
TL L M+ +P+D Q C + S H D
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSHTTD 189
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 468 TLALQXXMHXXNWPNDMQTCPFTLGSRMH 554
TL L M ++P+D Q C + S H
Sbjct: 127 TLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.4 bits (48), Expect = 2.8
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 194 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLASXER 355
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 356 LWRPDVVLLNA 388
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 305 WNAGEWGCSTWLASXERLWRPDVVLLNAAAXTAGDY 412
W G+ CS WLA +W +LN A + Y
Sbjct: 131 WIFGDLWCSIWLAVD--VWMCTASILNLCAISLDRY 164
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 337 PSAAAPLPCVPTQS 296
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +3
Query: 477 LQXXMHXXNWPNDMQTCPFTLGSRMHN 557
L + +P D+Q CP S HN
Sbjct: 140 LNCGLRLEKFPFDVQECPLIFESWTHN 166
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 586 CQSXSPXXSLLCILEPRVNGQ 524
CQ+ + S LC+ PR+N +
Sbjct: 36 CQAVNGHCSHLCLPAPRINSK 56
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 586 CQSXSPXXSLLCILEPRVNGQ 524
CQ+ + S LC+ PR+N +
Sbjct: 36 CQAVNGHCSHLCLPAPRINSK 56
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,496
Number of Sequences: 438
Number of extensions: 3881
Number of successful extensions: 64
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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