Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L15
(825 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 45 7e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 9e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 3e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 1e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 36 3e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 33 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.004
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 30 0.023
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.85
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 1.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 1.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 1.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 1.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 6.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 51.6 bits (118), Expect = 9e-09
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 486 XTCTFKFGSRMHNXDEMDFVI--DKRIYSM---FXSGAWDVTDL 602
TC KFGS N D++ + +K + + SG WD+ ++
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.8 bits (111), Expect = 6e-08
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 479
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 480 DMXTCTFKFGSRMHNXDEMDFVIDKRIYSM 569
D C FGS +H+ +E++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 47.2 bits (107), Expect = 2e-07
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 486 XTCTFKFGSRMHNXDEMDFVIDKRIYSMFXSGAWDV-TDLSSAVXSXDRGXVEXP 647
TC KFGS ++ ++D + + S DV DLS S + +E P
Sbjct: 165 QTCVLKFGSWTYDGFKVDL---RHMDEKSGSNVVDVGVDLSEFYMSVEWDILEVP 216
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.8 bits (106), Expect = 2e-07
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 486 XTCTFKFGSRMHNXDEMDFVIDKRIYSMFXSGAWDV-TDLSSAVXSXDRGXVEXP 647
TC KFGS ++ ++D + I + D+ DLS S + +E P
Sbjct: 161 QTCVMKFGSWTYDGFQVDL---RHIDEIRGKNVVDIGVDLSEFYTSVEWDILEVP 212
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 486 XTCTFKFGSRMHNXDEMDFVIDKR----IYSMFXSGAWDV 593
C KFGS ++ ++D + I S +G WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 45.2 bits (102), Expect = 7e-07
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 458
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 459 QLDNWPNDMXTCTFKFGSRMHNXDEMD 539
++ +P D +C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.8 bits (101), Expect = 1e-06
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 476
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 477 NDMXTCTFKFGSRMHNXDEMDFVIDKRIYSMFXSGAWDV-TDLSSAVXSXDRGXVEXP 647
D+ TC K GS ++ ++D + + S DV DLS S + +E P
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVDL---RHMDEKSGSNVVDVGVDLSEFYMSVEWDILEVP 216
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.6 bits (98), Expect = 2e-06
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 285 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 458
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 459 QLDNWPNDMXTCTFKFGSRMHNXDEMD 539
+ +P D TC KFGS ++ ++D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 9e-06
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 486 XTCTFKFGSRMHNXDEMDFVI 548
C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.7 bits (91), Expect = 2e-05
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 458
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 459 QLDNWPNDMXTCTFKFGSRMHNXDEMD 539
++ +P D TC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.9 bits (89), Expect = 3e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMX 488
ER+WRPD N + + R+S +G + + RL I M+L N+P D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 489 TCTFKFGS 512
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.5 bits (83), Expect = 1e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 321 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXT 491
R+W+PD N + T R+ +G V + RL I M L+N+P D
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 492 CTFKFGS 512
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 23.0 bits (47), Expect = 3.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 200 IRESESTVRILADLQMNWIDKRLSWNAGR 286
I E + T + + +W+D+RL++ G+
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGK 72
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPND 482
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 483 MXTCTFKFGSRMHNXDEMD 539
C K+ S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 315 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 485
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 486 XTCTFKFGS 512
CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMX 488
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTFKFGSRMHNXDEMDFVID 551
C + S H DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.023
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--W 473
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 474 PNDMXTCTFKFGSRMHNXDEM---DFVIDKRIYSMFXSGA-WDVTDLSSAVXSXD 626
P D+ CT S H +E+ ++ + M+ + W++ +S + + D
Sbjct: 167 PYDILNCTIHIASWSHGSNEIKLNSLDTEQILDDMYNNNTEWEIVHMSHSESTID 221
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 167 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 280
++ L ++H N+ E TV L++ W L+W +
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.85
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 482
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 483 MXTC 494
+ C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDEMDFV 545
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDEMDFV 545
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDEMDFV 545
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDEMDFV 545
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 601 CPVRCXAXTVARWXLPW 651
C VRC A + RW W
Sbjct: 19 CSVRCSAASGLRWFEIW 35
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,966
Number of Sequences: 438
Number of extensions: 4636
Number of successful extensions: 64
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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